Entry |
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Name |
(GenBank) DNA gyrase subunit A GyrA
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KO |
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Organism |
pck Candidatus Pantoea carbekii US
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Brite |
KEGG Orthology (KO) [BR:pck00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:pck03032]
BMSBPS_0183
03400 DNA repair and recombination proteins [BR:pck03400]
BMSBPS_0183
Enzymes [BR:pck01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BMSBPS_0183
DNA replication proteins [BR:pck03032]
Prokaryotic type
DNA Topoisomerases
BMSBPS_0183
DNA repair and recombination proteins [BR:pck03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BMSBPS_0183
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
258050..260662
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AA seq |
870 aa
MSGLAKEITLVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDAAVYDTLVRMAQPFSMRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKISHELLSDLDKETVDFISNYDNSEQIPAILPTKIPNLLINGSSGIAVGMAT
NIPPHNLTEVINACLAYIEDENISFEELIKHIPGPDFPTAAIINGRYGIEDAYRTGRGKI
HIRARSEVKNDVKTGRQSIVIHEIPYQVNKARLVEKIAELVKQRKLEGISALRDESDKDG
MRIVIELKRNVVSDVVLNNLYSLTQLQVSFGINMLALHQGQPKIMTLKDIIKSFINHRCE
VVTRRTVFELRKARERAHVLEGLIIALTNIDSIIELIRRSPTLAKAKVELISQTWKSTSL
LKMFDYSNNNLFSSIYSKSTFNKFDNTYHLTEQQIEAVLDLRLQKLTSLENEKLLIEYKE
VINQILKLISILKSTDCLMAVIRTELEKIRDQFGDKRRTEITVNSAELNVEDLINQEDVI
VTLSYHGYVKYQPLSDYEAQRRGGKGKSAARIKEEDIIDCLLVANTHDSILCFSSRGRLY
WMKVYQLPEASRSARGRPIVNLLPLDVNERITAILPVREYTKGFNILMSTAKGTVKKTAL
QEFSRPRSTGIIAINLHKNDELIGVALTNGSDEVMLFSAAGKVVRFSEATVRATGRLASG
VRGIKLAENDKVVSLIVPRAEGAILTVTQNGYGKRTINKAYPLKSRATQGVISIKVTKRN
GPVVGAVQVVDNDQIMMITNTGTLVRTRVSEVSIVGRNTQGVILIRTAENENVVGLQRVV
EPLKDQEFKNINDHVIESPEISKFELNNSH |
NT seq |
2613 nt +upstreamnt +downstreamnt
atgagcggtcttgcaaaagaaattacactagtcaatatcgaagaagaattaaaaaattct
tatctcgattatgctatgtcagtcattgtaggtcgagccttacctgatgtacgtgatggt
cttaaaccagttcaccgccgtgtgctttttgctatgagcgtcctgggtaatgattggaat
aaaccttataagaaatccgctcgtgtagttggtgatgtaattggaaagtaccatcctcac
ggtgatgctgcagtatatgacactttagtgcgaatggcacaaccgttttcgatgcgttat
atgttggttgatggtcaaggtaactttggttctattgatggtgattctgctgcagcaatg
cgttacacagaagtacgcatggcaaaaatttcccatgaactactgtctgacttggacaaa
gaaaccgttgattttatatcaaactacgataatagtgaacagattcctgcaattttgcca
acaaaaatacctaatttattaataaatggttcatctggtattgcagtaggcatggcaacc
aatattccgcctcacaatttaacagaagtaattaacgcttgtcttgcttatattgaagat
gaaaatatcagctttgaagaattgatcaaacatatacctggcccggattttcctactgca
gcgattatcaatggtcgttatggtattgaagatgcataccgcaccggtcgcggtaaaatc
cacatccgtgctcgtagtgaagttaaaaacgacgttaaaactggacgtcaaagtattgtt
atacatgagatcccttatcaggttaataaagctcgtttagttgagaaaattgctgaatta
gtaaaacaaagaaaacttgaaggtattagtgcactacgtgatgaatctgataaagatggt
atgcgtatagtaattgaactaaaacgtaatgtagtgagtgacgtagtattaaataatctt
tattcattgacccaacttcaggtatcatttggcattaatatgttagcactgcatcaaggt
cagccaaaaatcatgacgttgaaagatatcataaaatctttcataaatcaccgttgtgaa
gtagtaacacgtcgcactgtttttgaattacgcaaggcacgtgaacgtgctcatgttctt
gaaggtttaattattgctcttaccaatattgattctatcattgagttaattcgtcgttct
cccactttagctaaagctaaagtagagttaatttctcaaacatggaaatctactagtctt
ttaaaaatgtttgattattctaacaataatttattttcttctatatatagcaaatctacg
tttaataagtttgataatacttatcatttgactgaacaacaaatagaagctgttttagat
ctgcgattacaaaagttaactagtttagaaaatgaaaaattacttattgaatacaaggaa
gtaattaatcaaattttaaaactcatttccatactaaaaagtactgattgtttaatggca
gtaattcgaacagaattagaaaaaattcgtgatcaatttggagataagcgtcgcactgaa
attacggtaaatagtgcagaacttaatgttgaagatttaattaatcaagaagatgtgata
gtgacattatcgtatcatgggtacgttaaatatcaacctttatcagattatgaagctcaa
cgacgtggtggtaaaggtaaatctgcagcacgtatcaaagaagaagacattatcgactgt
ttgttagttgccaatactcatgatagcattctatgcttttctagtcgtggtcgtttatat
tggatgaaagtctatcaattaccagaagctagtcgtagtgctcggggtcgtccgatagtt
aatttgctaccgctcgacgtaaatgaacgtattactgctattcttcctgtacgtgaatat
accaaaggttttaatattttgatgtctactgctaaaggaactgttaaaaaaactgcatta
caagaatttagtcgtccgcgtagtacaggaattattgctattaatttacataaaaatgat
gagcttattggtgttgcattaactaacggtagcgatgaagtgatgttattttctgctgca
ggtaaagtagtgcgttttagcgaagctactgttcgagctacaggaagattagcatcaggt
gtaagaggcatcaaactggctgaaaatgataaagttgtctctttaattgtaccgcgtgca
gaaggtgctattcttactgtaacacagaatggatacggaaaacgcactattaataaagca
tatccattaaaatcacgtgcaactcaaggtgttatttcaattaaagtcaccaagcgtaat
ggaccagttgttggagcggtgcaagtggttgataatgatcaaattatgatgattactaat
actggcacattagtgcgtacgcgagtctctgaagtaagtatagtaggtcgtaatactcaa
ggtgtgattttaattcgtactgccgaaaatgagaatgttgttggtttacaacgtgttgtt
gaaccattaaaagatcaagagtttaaaaatattaacgatcatgtaatagaaagtccagag
attagcaaatttgaattaaataattcacattaa |