Candidatus Pantoea carbekii US: BMSBPS_0223
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Entry
BMSBPS_0223 CDS
T03853
Name
(GenBank) aspartyl-tRNA synthetase AspS
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pck
Candidatus Pantoea carbekii US
Pathway
pck00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pck00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BMSBPS_0223
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pck01007
]
BMSBPS_0223
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pck03016
]
BMSBPS_0223
03029 Mitochondrial biogenesis [BR:
pck03029
]
BMSBPS_0223
Enzymes [BR:
pck01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
BMSBPS_0223
Amino acid related enzymes [BR:
pck01007
]
Aminoacyl-tRNA synthetase
Class II (A)
BMSBPS_0223
Transfer RNA biogenesis [BR:
pck03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
BMSBPS_0223
Prokaryotic type
Other AARSs
BMSBPS_0223
Mitochondrial biogenesis [BR:
pck03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
BMSBPS_0223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
AKC32041
LinkDB
All DBs
Position
315005..316762
Genome browser
AA seq
585 aa
AA seq
DB search
MRTEYCGKINFSHINKKVTLCGWVNRYRNLGKLIFIDIRDCKGIVQVFFNSDYAEAFKVA
STLRNEFCIQITGIVLLRDEKNKNRDMLTGEIEICAHSINILNEAEPIPLDFHKTNNEET
RLKYRYLDLRHPIMLNRLKKRAKITSIVRRFMECEGFLDVETPILTKATPEGARDYLVPS
RIHKGTFYALPQSPQLFKQLLMISGFDRYYQIVKCFRDEDLRADRQPEFTQIDIEMSFIT
ADQVRDITERLIRTLWIQLINVDLGAFPKITFKEAISRYGSDKPDLRNPMQLIDVADLMK
KINFPLFYDAANDPKSRIAALCVPGGAKLTRKEIDKYCKYVENYGVKNLTWIKIANYINP
LQDSEGSITKHLSIDIIEKILKRTSAQNGDLIFFVADRIKVVSNSLGELRLKIGQDLKIT
NQHTWAPLWVIDFPMFEENDEGTIVAMHHTFTSPKTCYADHLKDQPLKTIANAYDMVING
YEVGSGSVRIHSEKIQRLVFNILGITKNEQQNKFGFLLDALKLGAPPHAGFAFGLDRLTM
LLTNSENIRDVIAFPKTTAASCLMTEAPSKVNATLLSELGIQIIP
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacagaatattgtggaaaaataaatttttctcatataaataagaaagttacttta
tgtggctgggtaaatcgctatcgtaatttgggtaaattaatttttattgatatacgtgat
tgtaagggtatagtacaagtattttttaattctgattatgctgaagcattcaaggtggca
tctacactgcgaaacgaattctgtattcagattactggtattgtattattacgtgatgaa
aagaataaaaatagagatatgctaacaggcgaaatagaaatatgtgcacattcaattaat
attcttaatgaggctgaacctattcctttagactttcataaaactaataatgaagaaaca
cgtttgaaataccgttatttggatttgcgtcatcctattatgcttaatagactaaaaaaa
cgtgctaaaattactagtattgttcgtcgtttcatggaatgtgaaggttttttagatgtt
gaaacaccaatattaactaaagcaactccagaaggtgctcgtgattatttagttcccagt
cgaatacataaaggcacattttatgcattgccacagtcaccgcagttgtttaaacaactt
ttaatgatatctggttttgatcgttattatcagattgttaagtgttttcgtgatgaagat
cttcgtgcagatcggcagccagaatttacacagattgatatcgagatgtcttttataaca
gctgatcaagtgcgtgatataacagaacgtctcattcgtaccttgtggattcaattgatc
aacgtagatctgggagcttttccaaaaataacgtttaaagaagctataagtcgttatggt
tctgataaacctgatttgcgcaatcctatgcaattaatagatgtagcagatttgatgaaa
aaaataaattttccattattttatgatgcagctaatgatcctaaaagtaggatagcagca
ctttgtgtaccaggaggagcaaaattaacgcgtaaagaaattgataaatactgtaaatat
gttgaaaattacggtgtcaaaaatttaacatggataaaaattgcaaattatatcaatcct
cttcaagattcagagggttcaataactaaacatttaagcatagatatcatagaaaaaatt
ttgaaacgtacttctgcacaaaatggtgatttaatattttttgttgctgaccgaattaaa
gtagtatctaattcattgggagaattacgtttaaaaataggtcaagatttgaagattact
aatcaacacacttgggctcctttatgggttatagattttccaatgtttgaagaaaatgat
gaaggtactatagtagcgatgcatcatacattcacttcgcctaagacatgttatgcagat
catttaaaagatcaaccactgaaaactattgcaaacgcatatgatatggtaattaatggc
tacgaagtaggtagtggttccgttcgcattcacagcgaaaaaatacaacgtttagttttt
aacatactaggcattactaaaaacgaacaacaaaataaatttgggtttttattagatgct
ttaaaattgggtgcaccaccacatgcaggatttgcatttggtttagatcgtttaaccatg
ctattaactaatagtgaaaatattcgggatgtaattgcttttccgaagactaccgcagcc
tcatgtttgatgacggaagcacctagtaaagtaaatgctactctgctatcagaactaggc
attcaaattataccataa
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