Candidatus Pantoea carbekii US: BMSBPS_0340
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Entry
BMSBPS_0340 CDS
T03853
Name
(GenBank) outer membrane protein A precursor OmpA
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pck
Candidatus Pantoea carbekii US
Brite
KEGG Orthology (KO) [BR:
pck00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pck02000
]
BMSBPS_0340
Transporters [BR:
pck02000
]
Other transporters
Pores ion channels [TC:
1
]
BMSBPS_0340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
DUF2490
DUF6807
Porin_2
Motif
Other DBs
NCBI-ProteinID:
AKC32149
LinkDB
All DBs
Position
477077..478150
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AA seq
357 aa
AA seq
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MKKTAIAMAVVLAGFATVVQATPRDNTWYNGVAMGWSNYHDINFYGNHYRPNQGPSTKCH
PGLRGFLGYQANPHLGFELGYDWLGRMANKGVIVNGSFKAHGLQLTTKLSRRISPHADLY
ARLGFMLWTADSMQHHSYMEFVNNRDNGIAPLAAIGVEYAITKNFATRLDYQWVNNIGDA
YTIGMRPDNGLLSIGVSYRFFQNQPTRPAVSPTIISSTPVVKTERFTLKSDVLFDFNSAT
LKLQGQQILDKLYQELKSMDTKDDSVVVLGFTDRMGSKKYNQKLSEQRAHSVIEYLVLKG
IPTDKISVHGMGKSNPVTGNTCNNVKGHKALINCLAPDRRVEIKIKGFKQVITKTQV
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacagctatcgcaatggcagtggtattggctggtttcgctacggtagtgcag
gccacccctagagataatacctggtataatggtgttgcaatgggctggtctaattaccat
gatattaatttttatggtaaccattaccgcccaaaccaaggtccaagcaccaaatgtcat
cctggactacgtggatttttaggttaccaagctaacccacatcttggatttgaattaggc
tatgattggttaggtcgtatggcaaataaaggagttatagttaacggctcatttaaagca
catggtttacagctaacaactaaattaagccgtcgaattagtcctcatgcggatttatat
gctcgtttaggctttatgctatggactgctgattctatgcaacaccattcatatatggag
tttgttaacaatcgtgataatggaattgctccattagctgctattggcgttgaatacgca
attactaaaaatttcgctactcgcttagattaccaatgggttaacaatataggtgatgct
tatactatcggtatgcgtcctgacaatggtctattaagtattggtgtttcgtaccgtttc
tttcaaaatcaacctacgcgaccagctgtttcacccactattatatcatcgaccccggtt
gttaaaactgagcgttttactttgaagtctgatgttttatttgatttcaatagtgctacc
ttgaaattacaaggtcaacaaattctggataaactgtatcaagaattaaaatctatggat
accaaggatgactccgttgtcgttttgggttttaccgatcgtatgggttccaaaaaatat
aatcaaaaattatccgaacaacgtgcacattctgttatcgaataccttgttttaaaagga
attccaactgacaaaatttctgtgcatggtatgggaaaatctaatccagtcactggcaat
acttgtaataatgtgaaaggacataaggcattaatcaattgtctagcaccggatcgtcgc
gttgaaataaaaataaagggttttaaacaagtgattactaaaacacaagtttaa
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