Candidatus Pantoea carbekii US: BMSBPS_0459
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Entry
BMSBPS_0459 CDS
T03853
Name
(GenBank) DNA polymerase III epsilon subunit DnaQ
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pck
Candidatus Pantoea carbekii US
Pathway
pck03030
DNA replication
pck03430
Mismatch repair
pck03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BMSBPS_0459
03430 Mismatch repair
BMSBPS_0459
03440 Homologous recombination
BMSBPS_0459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pck03032
]
BMSBPS_0459
03400 DNA repair and recombination proteins [BR:
pck03400
]
BMSBPS_0459
Enzymes [BR:
pck01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BMSBPS_0459
DNA replication proteins [BR:
pck03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BMSBPS_0459
DNA repair and recombination proteins [BR:
pck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BMSBPS_0459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
zf-SAP30
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AKC32258
UniProt:
U3U8Q6
LinkDB
All DBs
Position
complement(644107..644847)
Genome browser
AA seq
246 aa
AA seq
DB search
MSIIKNRQIFLDTETTGMNATGPHYKGHRIIEIGAVEVINRRLTKKNFHVYLKPDRSIDP
EAFKIHGISNEFLSDKPTFSDISNEFLEYIHGAELIIHNASFDIGFIDHEFGMLNSSIGR
VETFCQITDSLALARKLFPGKRNTLDALCNRYEIDRTKRTFHGALLDAEILSEVFLTMTG
GQTSLLFLDHEQCAHQSSNAPYSKHITHSMSSVDLRVLNADHKELIEHNRRLDLLQKISG
LCLWRK
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagcattataaagaatcgccagatttttttagatactgaaactactggtatgaacgcg
acagggccacattataaaggacatcgtattatagaaattggtgcagtcgaagtgatcaat
cggcgtctaactaaaaaaaattttcatgtatatcttaaacctgaccgatcgatagatcca
gaagctttcaaaatacatggtatttcaaatgaatttttatcggataagccaactttttct
gacatttctaacgaatttttagaatatatacatggtgctgaattaataattcataatgct
tcatttgatattggttttatagatcatgaattcggcatgctgaattcttctattggaaga
gtcgaaactttttgtcagataactgatagcttagcactagcacgtaaattatttcctggt
aaacgcaacactcttgatgcactgtgtaatcgttatgaaattgataggaccaaacgcacg
tttcatggagcattactcgatgcggaaattttgtctgaagtattcttaacaatgactggt
ggtcaaacatcactattatttttagatcatgaacagtgtgctcatcaatcatccaatgca
ccatatagtaaacatattacacattcaatgtcatcagtagatttacgtgttctcaatgct
gatcacaaagaactgattgaacataatcgtcgacttgatttattacaaaaaataagtggt
ctttgtctatggcgtaaataa
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