Candidatus Pantoea carbekii US: BMSBPS_0474
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Entry
BMSBPS_0474 CDS
T03853
Name
(GenBank) diaminopimelate epimerase DapF
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pck
Candidatus Pantoea carbekii US
Pathway
pck00300
Lysine biosynthesis
pck00470
D-Amino acid metabolism
pck01100
Metabolic pathways
pck01110
Biosynthesis of secondary metabolites
pck01120
Microbial metabolism in diverse environments
pck01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pck00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BMSBPS_0474
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BMSBPS_0474
Enzymes [BR:
pck01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BMSBPS_0474
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AKC32269
UniProt:
U3U1I3
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All DBs
Position
complement(666408..667259)
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AA seq
283 aa
AA seq
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MDNRFVKQKICFSKMHGLGNDFMVVDAVRQNIFFSQHLIRRLADRHIGIGFDQLLIVEPP
YDPDLDFHYQIFNADGSEAGQCGNGARCFARFVHLQGLTQKSNIYVSTQTGRMILSVLNE
KLVKVNMGEPKFEPQSIPFNTNTIQDCYLLNIANQNVIFGVVSIGNPHCVIQVENIKTAP
LKILGPLLENHQCFPNRINVGFMEIINPKHIYLRVYERGVGETQACGSGACAAVAYGIQR
GFLFETVRVDLPNGPLQISWKGTGKPLSMIGPAIHVYDGCISI
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggataatcgtttcgtaaaacaaaaaatatgtttttcgaaaatgcatggtctcggtaac
gattttatggttgtagatgctgtaagacaaaatatttttttctcacaacaccttattcgt
cgtttagcggatagacacataggcattggttttgatcaactattaattgttgaacctcct
tatgatcctgatctagattttcattatcaaatttttaatgctgatggtagtgaagcaggt
caatgtggaaacggtgctcgttgttttgctcgttttgtacatttacaaggattaactcaa
aaaagcaatatttacgtgagtacgcaaactggtcgtatgattttaagtgtgctcaatgaa
aaattagtaaaagtaaatatgggtgagcctaaatttgaaccacagtccataccgtttaat
acaaatacaattcaagattgttacctcctaaacatcgctaatcaaaatgtaatatttgga
gtggtttcaataggtaatccgcactgtgttatccaagtcgaaaatataaaaactgctcct
ttaaaaatacttggtccattgttagaaaatcatcaatgttttcccaatcgtattaacgtt
ggttttatggaaataattaatcctaagcatatttacttgcgtgtatacgaacgaggagtt
ggtgaaacacaggcttgtggtagtggtgcgtgtgctgcagtagcatatggcattcaacga
ggttttttatttgaaaccgttcgagtagatttgccaaatggccccttacagatttcttgg
aaaggtacaggaaaacctctatctatgattggacctgcaatacatgtttatgatggttgt
attagtatataa
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