Candidatus Pantoea carbekii US: BMSBPS_0495
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Entry
BMSBPS_0495 CDS
T03853
Name
(GenBank) DNA gyrase subunit B GyrB
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pck
Candidatus Pantoea carbekii US
Brite
KEGG Orthology (KO) [BR:
pck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pck03032
]
BMSBPS_0495
03400 DNA repair and recombination proteins [BR:
pck03400
]
BMSBPS_0495
Enzymes [BR:
pck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BMSBPS_0495
DNA replication proteins [BR:
pck03032
]
Prokaryotic type
DNA Topoisomerases
BMSBPS_0495
DNA repair and recombination proteins [BR:
pck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BMSBPS_0495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AKC32286
UniProt:
U3U589
LinkDB
All DBs
Position
complement(696478..698886)
Genome browser
AA seq
802 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGNTDDGTGLHHMVFEVVDNAIDEALAGQCNNII
VTIHTDNSVTVEDNGRGIPTGIHPEEGISAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGI
SVVNALSQKLDLIIHRDGKIYQQIYIHGVPQSALSIIGNNTTVTGTCIRFWPSYDIFSNV
IEFEYDILARRLRELSFLNSSIWIRLKDKRNNKQDHFHYEGGIQAFVEYLNRNKNPIHAN
ICYFSSEKDNISMEIALQWNDGFQENIYCFTNNIPQRDGGSHLAGFRAAVTRTFNVYVEK
EGYNKKNKINITGEDAREGLVAVISVKVADPKFSSQTKEKLVSSEVKSAVEQQTNEILQE
YLLERPYDAKIIITKIIDAARAREAARRAREITRRQGVLDLAGLPGKLADCQERDPVFSE
IYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVYIAQPPLYRVKK
GKQEQYIKDDEAMDKYKISIALEGAKLNINNTLIISGEELKKLVVELNSTYRMIKRMERF
FPFSLLHALIYNPALSDLSNKNTVKKWSESLVSYLAKSEVQNSSYTVQIQEDKTLNIFFP
ILQVRTHGIERHYALNIDFINGLEYRKICFLGNELRGLIKENTFIERGEHRQLVTNFEEA
FEWLAKESQRGLYMQRYKGLGEMNPVQLWTTTMDPESRCMRRVTVKDAIAADQLFTTLMG
DAVEPRRAFIEENALKVSNIDI
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcctatgactcctctagtattaaagtcctcaaaggacttgatgcagtgcgc
aaacgtccaggtatgtatattggtaacacagatgatggaactggtttgcatcatatggta
ttcgaagttgtagataacgctatcgatgaagcgctcgctggccaatgtaataatattatt
gtaactattcatacagataattctgtaacagtagaagataatggtcgaggtatcccaact
ggtattcatcctgaagaagggatctctgctgctgaagtaattatgaccgtattacatgca
ggtggtaaatttgatgataattcgtataaggtctctggtggtttacacggtgtaggtatt
tcggtagtaaacgcactgtcgcaaaaactcgatttaatcattcatcgtgatggaaaaata
taccaacaaatttacattcatggtgtaccacagagcgcattaagtataattggcaataat
actacagtaaccggtacgtgcatacgtttttggcccagttatgatatcttctctaacgta
attgaatttgaatatgatattctagcaagacgtttacgtgaattgtcatttttaaattct
agcatctggattcggctgaaagataaacgtaataataagcaagatcactttcattatgaa
ggaggtattcaagcgtttgttgagtatttaaatcgcaataaaaatcccattcacgctaat
atttgttatttttcttctgaaaaagacaatatcagcatggagattgctttgcagtggaat
gatggttttcaggaaaacatctactgctttactaacaatattccacaacgtgatggtggc
tctcatttagcaggttttcgtgcagccgtaactcgtacatttaatgtatatgtagagaag
gaaggatacaataaaaaaaacaaaattaatattacaggcgaggatgcacgtgaaggttta
gtggcagttatatcggtaaaagtagcggatccaaaattttcctcacagactaaagagaaa
ttagtttcgtcggaagtcaagtccgcagttgaacaacagacaaatgaaattttacaagaa
tatcttctagaaaggccatatgatgctaaaataatcataactaaaattattgatgcagca
agggcacgcgaagcagcacgtcgagcacgagaaataactcgtcgtcaaggtgtacttgat
ttagctggattgccgggtaaattagcagattgccaggaacgtgatccagtattttctgaa
atatatttagttgagggagattctgctggtggatccgcaaaacaagggcgcaatcgtaaa
aatcaagcgattttaccactgaaaggcaagattcttaacgttgaaaaagcgcgctttgat
aaaatgctttcttcacaagaagtagctactttaattactgctttaggctgtggtatcggg
cgtgatgagtataatccagacaaactacgttatcatagtattataattatgactgatgca
gacgtagatggttcgcatattcgtactttgctattgacatttttctatcgccaaatgcct
gaaattattgaacgaggtcatgtttatattgctcaaccgcctctttatagagttaaaaaa
ggaaaacaagaacagtatataaaagacgatgaggcaatggataaatataagatttctata
gcgctggaaggtgctaagctaaatattaacaatacgttaatcataagtggcgaagaactt
aaaaaattagtcgttgaattgaatagtacctatagaatgattaaacgtatggaacgtttt
tttccgttttcgttactacatgcactaatttataatcccgctttaagtgatctgagtaat
aaaaatacagtaaaaaaatggtcggaaagtttagtaagttatctagctaagtcagaagta
cagaacagctcttatacagtacagatacaagaggataaaacgttaaatatattttttcct
atactgcaagttcgtactcatggtatagaaagacattatgcactaaatattgatttcatc
aatgggttggaataccgtaaaatttgttttttaggtaacgaattacgtggtttaattaaa
gaaaatacttttatagaacgcggcgaacatcgtcaattagtaactaattttgaagaagcg
tttgaatggcttgctaaagaatctcaacgtggtttatatatgcagaggtataaaggtttg
ggagaaatgaatccagtacaattatggactactactatggatccagaaagtcgatgtatg
cgacgtgttactgttaaagatgctatagctgctgatcaacttttcactacattaatgggt
gatgcagtagaacccagacgggcatttatagaagaaaatgcattgaaagtttctaatatt
gatatttaa
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