Candidatus Pantoea carbekii US: BMSBPS_0610
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Entry
BMSBPS_0610 CDS
T03853
Name
(GenBank) lysyl-tRNA synthetase (class II)
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pck
Candidatus Pantoea carbekii US
Pathway
pck00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pck00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BMSBPS_0610
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pck01007
]
BMSBPS_0610
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pck03016
]
BMSBPS_0610
Enzymes [BR:
pck01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
BMSBPS_0610
Amino acid related enzymes [BR:
pck01007
]
Aminoacyl-tRNA synthetase
Class II (A)
BMSBPS_0610
Transfer RNA biogenesis [BR:
pck03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
BMSBPS_0610
Prokaryotic type
Other AARSs
BMSBPS_0610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
LytM_N
Motif
Other DBs
NCBI-ProteinID:
AKC32394
UniProt:
U3U6Z6
LinkDB
All DBs
Position
853071..854591
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AA seq
506 aa
AA seq
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MSEKEPNDPNNTLVLNHELKIRREKLHILLKNNIAFPNNFRRDIISDEIHDRYSQKSNEE
IKKLGIVVSVAGRMMNRRIMGKASFVILQDVGGRIQLYVMRENLSEGIYDEQFKKWDIGD
IIGARGKLFKTKTGELSIHCIELHLLTKSLRPLPDKFHGLTDQETRYRQRYLDLLINKQS
RTIFKVRSNIIMCIRNFMIENNFMEVETPMMQNIAGGASARPFITHYNALNIDMYLRIAP
ELYLKRLVIGGFERIFELNRNFRNEGISTHHNPEFTMMEVYMAYADYNDMIQLMENLLRT
LSIKVLGTTKISYGKYNFDFSEPFEKLTMSEAIQKYCPKTDMIDFENFDKVVSMAHSLHI
KTEKHWSLGRIITEIFEAIVEKNLIQPTFITEYPVEVSPLARRNDKKLEITDRFEFFVGG
HEIGNGFSELNDPEDQANRFQKQIITKKTDYSETICYDEDYVIALEHGLPPTAGLGIGID
RLVMLLTNSHTIRDVILFPSMRFKKH
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaagaaccaaacgaccctaataatacgctcgtattaaaccatgaactaaaa
atacgtcgtgaaaagctccatatactactaaaaaataatatagcttttcctaataatttt
cgtcgagatattatctctgatgaaatccatgatcgttattctcaaaaaagtaacgaagaa
ataaaaaaacttggtattgtagtgagcgtagctggtcgcatgatgaatcgacgcataatg
ggtaaagcttcatttgtaatcttacaagatgtaggtggtcgtattcagctttatgtaatg
cgtgaaaatttatctgaaggtatatacgatgaacaattcaaaaaatgggatattggggat
attattggtgcacgtggtaaattatttaagactaaaaccggtgagctatctattcattgt
attgaactacatttactcacaaaatcattgcgtccattgcctgacaaatttcatgggtta
actgatcaagaaactcgttatcgtcagcgttatcttgatttacttattaataagcaatcg
cgtacaatttttaaagtacgttctaacatcatcatgtgcatacgtaactttatgatcgaa
aataattttatggaagtagaaacgccaatgatgcaaaatattgccggtggtgcttccgca
cgaccatttattacacactataatgcacttaatattgatatgtacctacgaattgcacca
gagctatatttaaaacgtcttgtaataggtggtttcgagagaatttttgaactaaatcgt
aactttcgtaatgaaggcatttcgacacatcataatccagagtttactatgatggaagtg
tatatggcatatgcagattataatgatatgattcaattgatggaaaatctattgcgaact
ttatctataaaagttttaggtaccacaaagatttcgtatggaaaatataattttgatttt
agtgagccttttgaaaaacttactatgtctgaagctattcagaaatattgtccaaaaaca
gatatgatagattttgaaaattttgataaagtagtatctatggcgcattcactacatatt
aaaactgaaaaacattggagtttagggcgaataattacagaaatttttgaagcaatcgtt
gaaaaaaacttgattcaacctacattcattactgaatatccagttgaagtttctccatta
gcacgtcgtaacgataaaaaattggaaattacagatcgttttgagttctttgttggtggt
catgaaattggtaatggtttttctgagcttaatgatcctgaggatcaagcaaatcgcttt
caaaaacaaataattacaaaaaaaacagattacagtgaaacgatttgttatgatgaagat
tacgtcattgcattagagcatggcttgccaccaacggcaggattaggcattggtattgat
cgtttggtaatgttactaacaaatagccatactatccgagacgtgattttatttccgtca
atgcgttttaaaaaacactag
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