Candidatus Pantoea carbekii US: BMSBPS_0684
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Entry
BMSBPS_0684 CDS
T03853
Name
(GenBank) catabolite gene activator Crp
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pck
Candidatus Pantoea carbekii US
Pathway
pck02020
Two-component system
pck02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pck00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BMSBPS_0684
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BMSBPS_0684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pck03000
]
BMSBPS_0684
Transcription factors [BR:
pck03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
BMSBPS_0684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
MarR
HTH_36
Sigma70_r4
HTH_24
HTH_23
HTH_11
MarR_2
KwaB
RepL
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AKC32461
UniProt:
U3U7G5
LinkDB
All DBs
Position
complement(969861..970493)
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AA seq
210 aa
AA seq
DB search
MALGKIQTNSLLEWFLSHCHIHKHSSKSTLIYQGAKAETLYYIVKGIVVVLLKDNDGKEI
ILSYLNQGDFIGEIALFEKDHKRSAWVRTKTFCEIAEISYRKFFYLVSINPNILVHLLKQ
LAHRLQMTSDKLGNLAFLDVAGRIAKTLLNLTQQPNAITHPDGMQIKITRQEIGQIVGCS
RETVGRILKMLEDQNLISVYGKTIVVYGMR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggctctcggtaaaatacaaacaaattctctgctagaatggttcctgtcccattgtcac
attcacaaacattcatctaaaagtacactaatctatcaaggtgcaaaagcagaaacgcta
tattatatagtaaaaggtattgttgtagtattacttaaagataatgacggtaaagaaata
atcctgtcttatcttaatcaaggagattttatcggcgaaattgctttatttgaaaaagat
cataaacgtagtgcgtgggtacgtacgaaaactttctgcgaaattgctgaaatttcttat
agaaaatttttttatcttgtgagtatcaatccaaatattttagtacatttattaaagcaa
ttagcccatcgtttacaaatgacatcagataaattaggtaatcttgcttttcttgatgta
gctggaagaattgcaaaaactttacttaatttaactcaacaaccaaatgctattacccat
cctgatggaatgcaaattaaaattacccgtcaggaaattggtcaaatagtaggatgttca
cgtgaaactgtaggccgtatactaaaaatgctagaagatcaaaacctcatttctgtttat
ggcaaaactatagttgtttatggcatgcgttaa
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