KEGG   Pyrobaculum calidifontis: Pcal_0266
Entry
Pcal_0266         CDS       T00483                                 
Name
(GenBank) CRISPR-associated HTH regulatory protein, Csa3 family
  KO
K07725  CRISPR-associated protein Csa3
Organism
pcl  Pyrobaculum calidifontis
Brite
KEGG Orthology (KO) [BR:pcl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pcl03000]
    Pcal_0266
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pcl02048]
    Pcal_0266
Transcription factors [BR:pcl03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    Pcal_0266
Prokaryotic defense system [BR:pcl02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    Pcal_0266
SSDB
Motif
Pfam: HTH_20 HTH_5 HTH_24 MarR HTH_11 HTH_28 TrmB HTH_IclR DUF6293 HTH_29 TFIIE_alpha MarR_2 HTH_36 HTH_AsnC-type Fe_dep_repress HTH_27 Rrf2 HTH_DeoR DUF2250 HTH_23 GntR LexA_DNA_bind Put_DNA-bind_N HTH_38 RP-C HTH_Crp_2 Thump_like HTH_1 HTH_12 Xre-like-HTH HTH_34 Dimerisation2 DUF4423 HrcA_DNA-bdg HTH_9 HTH_10
Other DBs
NCBI-ProteinID: ABO07703
UniProt: A3MST6
LinkDB
Position
complement(260813..261526)
AA seq 237 aa
MHTLFPLKINLKLYTAVRLLVFTLGFEEKFAIRAFTRRGLDVGDRILLVAARPAADRVVR
AYNTLREFVQRYYGGGVEIELVEVNVRDFPGAVCEIRRRVLEKAGGDVVVNLSGGPRALV
LATYAAVQLLPDDVAKRVRVEVEFEDGTYLVEVPLCAVYAQKLAERLGEEKLAVLEKLAQ
RGVATAEELAREVNLDSSTVRRHIRRLEELGLVQVLSKRPLRAELTQDAKVITCLRE
NT seq 714 nt   +upstreamnt  +downstreamnt
ttgcacacactttttcctcttaaaataaatttaaagctatacacagccgtgcgtctcctc
gtgtttaccctcggctttgaggaaaagtttgccataagggccttcacgaggagggggcta
gacgtgggggacagaatcctcctcgtagcggcgaggccggccgccgacagagtggtaagg
gcgtacaacactctgcgggagttcgtccaaaggtactacggcgggggcgtcgagattgag
ctcgtcgaagtgaacgtgagagacttcccgggcgccgtctgtgaaattaggcggcgcgtc
cttgaaaaagccggcggggacgtggtggtgaacctctcgggcgggccgagggccctggtc
ttggccacttacgcggccgtccagctcctccccgacgacgtggcaaagagggttagagtg
gaggtggagttcgaggatgggacctacctcgtggaagtaccgctgtgcgctgtgtatgcc
caaaaactcgccgagaggctcggcgaggaaaaactcgccgtcttggagaagctggcccag
aggggggtggcgacggcggaggagctggcaagggaggtaaacctagactcctccactgtg
aggaggcacatacggcgcttagaggagttgggcttagtccaagtgctgagcaagaggccc
cttagggcagagctaacacaagatgctaaggttataacatgtctacgcgaatga

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