Pyrobaculum calidifontis: Pcal_0307
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Entry
Pcal_0307 CDS
T00483
Name
(GenBank) Ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
pcl
Pyrobaculum calidifontis
Pathway
pcl03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Pcal_0307
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Pcal_0307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pcl03011
]
Pcal_0307
04121 Ubiquitin system [BR:
pcl04121
]
Pcal_0307
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcl04147
]
Pcal_0307
Ribosome [BR:
pcl03011
]
Ribosomal proteins
Eukaryotes
Small subunit
Pcal_0307
Archaea
Pcal_0307
Ubiquitin system [BR:
pcl04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
Pcal_0307
Exosome [BR:
pcl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pcal_0307
Exosomal proteins of colorectal cancer cells
Pcal_0307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S27
Cas12f1-like_TNB
Zn_ribbon_Nudix
Zn_ribbon_IS1595
Zn_ribbon_SprT
Ribosomal_L37ae
EDR4-like_1st
DUF1451
Zn_ribbon_3
Zn_ribbon_TFIIB
zf-C2H2_ZN142
Zn_Ribbon_1
YhfH
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
ABO07742
UniProt:
A3MSX5
LinkDB
All DBs
Position
297593..297790
Genome browser
AA seq
65 aa
AA seq
DB search
MSKKAPAKEGKKLPRAATWYEIDMEKGVFRFKNKLCPKCGSVMAFHREPVPRWHCGKCGF
TQFQR
NT seq
198 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagaaggcgcctgccaaagagggtaagaagctgccccgcgcggcgacttggtac
gagattgacatggagaagggggtgtttaggtttaagaacaagctctgccccaagtgtggc
tctgtcatggccttccaccgcgagcccgtgccgcgttggcactgcggtaagtgtggtttt
actcagttccagaggtga
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