KEGG   Pyrobaculum calidifontis: Pcal_0307
Entry
Pcal_0307         CDS       T00483                                 
Name
(GenBank) Ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
pcl  Pyrobaculum calidifontis
Pathway
pcl03010  Ribosome
Brite
KEGG Orthology (KO) [BR:pcl00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    Pcal_0307
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    Pcal_0307
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:pcl03011]
    Pcal_0307
   04121 Ubiquitin system [BR:pcl04121]
    Pcal_0307
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pcl04147]
    Pcal_0307
Ribosome [BR:pcl03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    Pcal_0307
  Archaea
    Pcal_0307
Ubiquitin system [BR:pcl04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   Pcal_0307
Exosome [BR:pcl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Pcal_0307
  Exosomal proteins of colorectal cancer cells
   Pcal_0307
SSDB
Motif
Pfam: Ribosomal_S27 Cas12f1-like_TNB Zn_ribbon_Nudix Zn_ribbon_IS1595 Zn_ribbon_SprT Ribosomal_L37ae EDR4-like_1st DUF1451 Zn_ribbon_3 Zn_ribbon_TFIIB zf-C2H2_ZN142 Zn_Ribbon_1 YhfH Zn_Ribbon_TF
Other DBs
NCBI-ProteinID: ABO07742
UniProt: A3MSX5
LinkDB
Position
297593..297790
AA seq 65 aa
MSKKAPAKEGKKLPRAATWYEIDMEKGVFRFKNKLCPKCGSVMAFHREPVPRWHCGKCGF
TQFQR
NT seq 198 nt   +upstreamnt  +downstreamnt
atgtctaagaaggcgcctgccaaagagggtaagaagctgccccgcgcggcgacttggtac
gagattgacatggagaagggggtgtttaggtttaagaacaagctctgccccaagtgtggc
tctgtcatggccttccaccgcgagcccgtgccgcgttggcactgcggtaagtgtggtttt
actcagttccagaggtga

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