Pyrobaculum calidifontis: Pcal_0355
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Entry
Pcal_0355 CDS
T00483
Name
(GenBank) peptide chain release factor subunit 1 (aeRF-1)
KO
K03265
peptide chain release factor subunit 1
Organism
pcl
Pyrobaculum calidifontis
Pathway
pcl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Pcal_0355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcl03019
]
Pcal_0355
03012 Translation factors [BR:
pcl03012
]
Pcal_0355
Messenger RNA biogenesis [BR:
pcl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Pcal_0355
Translation factors [BR:
pcl03012
]
Eukaryotic type
Release factors
Pcal_0355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_1
eRF1_3
baeRF_family10
acVLRF1
Ribosomal_L7Ae
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ABO07790
UniProt:
A3MT23
LinkDB
All DBs
Position
339604..340758
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AA seq
384 aa
AA seq
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MAFARPPNGVYHLKTPVELRAFINVLKKFRGYATTLITLYINSERPMPDVLNLLRSEWST
ASNIKDKTTRTHVQDTLERIINNLKGEAKAPENGMAVFAGFHMISQGNYEWVYYVVVPPQ
PINTFKYICDTVFHTELLEDQLHSGVVYGVIVIERGEAVIALLKNSRWEVVKTVEFFVPG
KHHAGGQSANRFKRQTEHLAETFYKLVAEEANRVFLQIPTLKGIIVAGPGPTKEDFLEEG
GLDYRLKDKVLAVVPACCANEYGVMEAIKNAQEQLKESEYVKAKETMERVMFYAVKKSDY
IVYGKEKVMKALETGLAEVVIVAEELGEDVVLEVIMKAEEKGVKVEVVPKGVEESATLVK
AFGGFVALLNAPSWLLEQQQTAQA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgctcgaccgccgaacggcgtgtaccacttgaagacgccggtggagctgagg
gcgtttatcaacgtgttgaagaagtttaggggctacgccacgactttgatcactctatat
atcaactcggagcggcctatgccagacgtgttgaacttattgaggtctgagtggtccacg
gcctcaaacatcaaggacaaaaccacgcgtacacacgtgcaagacaccttggagcgcatt
atcaataacctgaagggcgaggctaaggcccccgagaacgggatggctgtcttcgccggg
ttccacatgattagccaggggaactacgagtgggtttactacgtcgtcgtgccgcctcag
ccgataaacacgttcaagtacatctgcgacacggtcttccacacggagcttctggaggac
cagctccactccggggtggtatacggagtgatcgtaattgagcggggtgaggccgtgatt
gcgctgttgaagaacagcagatgggaggtggttaagaccgtggagttttttgtgccaggg
aagcaccacgccggcggccagtccgcgaaccgcttcaagcggcagactgagcacttggcc
gagacgttttacaagctggtggctgaggaggcaaaccgcgtctttctccaaatccccacg
ctgaagggcataatagtcgcaggtccgggcccaaccaaggaagacttcctcgaggagggg
ggcctcgactacaggctaaaggacaaggtgttggccgtcgtacctgcctgttgcgccaat
gagtacggggtcatggaggccattaagaacgcccaggagcagttgaaggagagcgagtat
gtcaaggcaaaggagaccatggagcgcgtcatgttctacgcggtgaagaagagcgactac
attgtgtacggcaaggagaaggtgatgaaggccctcgagacaggcctcgcggaggtggtc
atcgtggccgaggagctgggagaggacgtggtgctggaggtgattatgaaggcagaggag
aagggggtcaaggtagaggtggtgcccaagggcgtggaggagagcgccaccttggtcaaa
gccttcggcggcttcgtggctctgttaaacgccccatcttggttgctcgaacaacaacag
acagcacaggcctaa
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