Pyrobaculum calidifontis: Pcal_0411
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Entry
Pcal_0411 CDS
T00483
Name
(GenBank) putative ATP binding protein
KO
K04485
DNA repair protein RadA/Sms
Organism
pcl
Pyrobaculum calidifontis
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcl03400
]
Pcal_0411
DNA repair and recombination proteins [BR:
pcl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Pcal_0411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA
AAA_5
AAA_16
AAA_25
IstB_IS21
AAA_22
RuvB_N
AAA_24
AAA_18
nSTAND3
RecA_N
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ABO07845
UniProt:
A3MT78
LinkDB
All DBs
Position
394298..395482
Genome browser
AA seq
394 aa
AA seq
DB search
MWSGFEFFEGFSLLYGPPGAGKTSLALYAAFRLGDRVLYAGFYETGEAVVSKARALGLDV
GRLTVLDFFAVSDADVLYSTLVSKYVEVKPDVAILDGINALPQSREAAASIYRIFRGPVI
AIGEESVGGSHFAYYADSLVEVRQVFHRGARYRLLRVVKTRLSPSRGAEYFFTISRRGVH
LLRRWSQGSLGGKLAATPSGRRATFSEEVVKALVGRAPAYTRPGLLAGSRVGVFLEDHPT
PLRLAAAFLCDYLDESRVGVVSTYPLMGSLARQVGCSVEEVVVPAAVLDDDAALHEALDK
VGDVSVVALYGLEEVLARYGARRVGYVMDFFQTFLPDSAVLATFRGVEPTRALLGMFNTA
WRYYPDRAVVVKSALGWPVRELRVVERDGRFYLG
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcggctttgagttttttgagggcttttctctcctgtacggcccgcctggcgct
gggaagacgtcgcttgccctctatgcggcctttcgcttgggggaccgtgtcctctacgcg
gggttctacgagactggggaggcggtggtgtctaaggcgagggcgctgggcctcgacgtg
gggaggctgacggtgttggacttcttcgctgtctctgacgcagatgtgttgtacagcacg
ttggtttctaagtacgtggaggtgaagcctgacgtggccatcttggatggaatcaacgcc
cttcctcagtctagggaggcggccgcctctatataccgcatctttagggggcctgttata
gccatcggcgaggagtctgtcggggggtcccacttcgcctactacgccgactcgttggtg
gaggttaggcaggtcttccacaggggggcccgctataggcttctccgggtggtgaagact
aggcttagcccgagccgcggcgccgagtactttttcactatctcgcggaggggggtgcac
ctccttaggaggtggtctcagggctcgctggggggcaagctggccgcaacgccttctggc
agaagggccacgttttctgaggaggtggtgaaggcgcttgtgggccgggctcccgcctac
acgcggccggggttgctggctgggagcagggttggggtgtttctcgaggatcacccgacg
cctctccgcttggcggctgccttcctctgcgactacttagacgagtcgagggtgggcgtg
gtgtcgacgtacccgcttatgggctctttggctaggcaggtgggctgtagcgtggaggag
gtggtggtgcccgccgccgtgcttgacgacgatgcggctctccacgaggcgttggacaag
gtgggggatgtgtctgtggttgcgttgtacggccttgaggaggtgttggcccgctacggc
gcgaggagggtggggtacgtcatggacttcttccagaccttcctccccgactccgccgtc
ttggccacgtttaggggagtggagcccacgcgggcgcttttgggcatgtttaacactgcg
tggaggtactaccccgaccgcgccgtggtggtcaagtcggcgcttgggtggcctgtgaga
gagctcagggtggtggagcgggacggccgcttctacctggggtag
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