Pyrobaculum calidifontis: Pcal_0430
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Entry
Pcal_0430 CDS
T00483
Name
(GenBank) Zinc finger, TFIIB-type domain protein
KO
K03124
transcription initiation factor TFIIB
Organism
pcl
Pyrobaculum calidifontis
Pathway
pcl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Pcal_0430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcl03021
]
Pcal_0430
Transcription machinery [BR:
pcl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Pcal_0430
Prokaryotic type
Archaeal type
TFB
Pcal_0430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RRN7
Zn_Ribbon_TF
A2L_zn_ribbon
TFIIB
Lar_restr_allev
Zn_ribbon_DUF2089
TPR_MalT
HTH_1
Zn_ribbon_Nudix
Auto_anti-p27
RWP-RK
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
ABO07864
UniProt:
A3MT97
LinkDB
All DBs
Position
416807..417361
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AA seq
184 aa
AA seq
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MACPVCGGRAVVVSPDGEYVCVQCGTVIGPVYMWPIRRVDERLAEKAAELSKGLRLALVK
RGVPLREWLELEGARAWLEQKRRLTAWIPPSKRVEYYIEAAAAKLGLGRAALEEALALYR
RLDRRALVGKSPRVVAAVIYTATCTPARAAAEALGVSPISVKATVRKLKLAVKICVRRGV
PRGA
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcccagtgtgcggcggcagagcggtggtggttagcccagacggcgagtatgtc
tgcgtccagtgtggcacagtgattgggccggtgtatatgtggccaatccgccgcgttgac
gagaggctggctgagaaggcggctgagctgtcgaaggggctgaggttggcgctggtgaag
aggggtgtcccgctgagggagtggcttgagctagagggagcaagggcatggctagaacag
aagcgaagactcaccgcgtggattccgccttcgaagagggtggagtactacatcgaagcc
gctgcggcgaagcttgggcttgggagggcggcgttggaggaggctttggcgctctatagg
cgtctggataggagggcgcttgtgggaaagtcgccgagggttgtggccgccgtcatatac
accgccacgtgcaccccagcccgcgccgcggctgaggcgctgggagtaagcccaatatcg
gtcaaggctactgtgcgtaagctgaagctggcggtaaagatatgcgtcaggaggggcgtc
ccgagaggggcgtaa
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