Pyrobaculum calidifontis: Pcal_0547
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Entry
Pcal_0547 CDS
T00483
Name
(GenBank) translation elongation factor 1A GTP binding domain family
KO
K03231
elongation factor 1-alpha
Organism
pcl
Pyrobaculum calidifontis
Pathway
pcl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Pcal_0547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcl03019
]
Pcal_0547
03016 Transfer RNA biogenesis [BR:
pcl03016
]
Pcal_0547
03012 Translation factors [BR:
pcl03012
]
Pcal_0547
04131 Membrane trafficking [BR:
pcl04131
]
Pcal_0547
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcl04147
]
Pcal_0547
Messenger RNA biogenesis [BR:
pcl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
Pcal_0547
Transfer RNA biogenesis [BR:
pcl03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
Pcal_0547
Translation factors [BR:
pcl03012
]
Eukaryotic type
Elongation factors
Pcal_0547
Membrane trafficking [BR:
pcl04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
Pcal_0547
Exosome [BR:
pcl04147
]
Exosomal proteins
Proteins found in most exosomes
Pcal_0547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP_EFTU_D3
CbiJ
GTP-eEF1A_C
Motif
Other DBs
NCBI-ProteinID:
ABO07974
UniProt:
A3MTK7
LinkDB
All DBs
Position
complement(518997..520559)
Genome browser
AA seq
520 aa
AA seq
DB search
MDFYPPESEEGNVEYKLVLGEGDLDKLGGQLKRRLLEGGGEAIYVIGVSNDGRPLGLPDD
ELFKSLGVLREVAKRVGASLHLLRISEGVRGKVAEVLIRAVGREEPPPTVTIIVLGNVDA
GKSTLVGVLTTGKLDDGRGLARAYASRYKHEVLTGRTSAVSMRLLGFVGDSVVNHKLVDP
LDEAEVYRRSDKLALLVDVGGHERYVRTVLRGLFSSEPDYAALVVAANSGVQKMTKEHLG
VAVALGIPVFVVVTRVDIAPPEVFQRTVEELVRLLKMPGVSKIPYVVKDMGDVVLAARAM
SSGRVAPIFYVSNVTGQGVDMLAKFIALLPRRRRWDSGGEPLLYISDIYMVKGVGVVVGG
LVERGAVKVGERLWLGPYEDGRWAPAVVKSIHLNRTPVERVGAGNFVTIALDRVEDVEKG
MVLAARPLPSVREVVAEVLVLRHPTAIRAGFSGVFHYKAIRASAYIKELDRGVLMAGDNG
VARIAFTRPWYIEGGVFIFRNGPTRIFGRVVRLENGTAIS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
gtggatttttaccccccggagtccgaggagggcaacgtcgagtacaagcttgtcctaggc
gagggggatttggacaagctcgggggccagctgaagaggcgcctcttggagggcggcggc
gaggccatctacgtcataggcgtttcaaacgacgggaggcctctcgggcttcccgacgac
gagttgtttaagtcgctgggagtgttgagagaagtcgccaagagggttggcgcatctctg
catctcttgagaatttcggagggcgtcagaggcaaagtcgccgaggtgttgataagggca
gttggaagagaggagcccccgcccactgtgacaataatcgtgttgggcaacgtggacgcg
ggcaagtctaccctcgtgggcgtcttaaccactgggaagctagacgacgggagagggctg
gccagggcctacgcctcgcggtataaacacgaggtgttgacaggccgcacctccgcagtc
tctatgaggcttttgggatttgtaggagactccgtggttaatcacaagctggtggatccg
ctggacgaggcggaggtctaccggcggtccgacaagctcgccctgttggtggacgtgggg
ggccacgagaggtatgtgagaacagtcctcagaggcctctttagctctgagccagactac
gccgctttggtggtggccgcgaactccggcgtccagaaaatgactaaggagcacttggga
gtggcagtggcgctcggcatccccgtattcgtggttgtgacaagggtagacatagctccg
cccgaggtgtttcagaggactgtggaggaactggtcagattgttgaagatgccgggggtg
agcaaaataccctatgtggttaaagacatgggcgacgtagtgctggccgcgagggccatg
tcctcgggacgcgtggcgcccatattctacgtgtctaatgtaacggggcagggcgtagac
atgcttgcaaagttcatcgccctgcttcccaggaggaggcgctgggactcggggggagag
cccctcctctacatatccgacatatacatggtcaagggcgtgggagtggtggtggggggg
ctcgtggagaggggcgcggtaaaggtcggggaaaggctgtggctggggccctacgaggac
gggaggtgggcgcctgcggtagttaaatctatacacttgaacagaacccccgtcgagcga
gtgggcgcggggaacttcgtcaccatagccctcgacagagtagaagacgtggagaagggc
atggtgctggccgccaggccgttgcccagcgtgagagaggtggtggccgaagtcctcgta
ttaaggcatcccaccgcgattagggcaggcttctcgggcgtctttcactacaaggccatc
agggccagcgcatacataaaagagctcgacaggggggtcctcatggcaggcgacaatggg
gtggcccgcatagcgttcacgcggccttggtacatcgagggtggggtcttcatttttaga
aatggaccgacgcgtatatttggtagagtagtgcgcctagaaaatggaactgctatctcc
taa
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