Pyrobaculum calidifontis: Pcal_0700
Help
Entry
Pcal_0700 CDS
T00483
Name
(GenBank) Pseudouridylate synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pcl
Pyrobaculum calidifontis
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcl03016
]
Pcal_0700
Enzymes [BR:
pcl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Pcal_0700
Transfer RNA biogenesis [BR:
pcl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pcal_0700
Prokaryotic type
Pcal_0700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ABO08126
UniProt:
A3MU09
LinkDB
All DBs
Position
complement(664401..665174)
Genome browser
AA seq
257 aa
AA seq
DB search
MPYLYRVAYDGALFHGFTGHSNSVEAALRRVFGHLLGRGSRTDPGVSAVGNAVLAPSRLP
LGYINSRLPRGVWTWAVAEVGEGFNPRRARRRRYLYVAPHWGEDVEAMREVAELFKGTHD
FSSFIQFRGERGTPPVTTVDEVGVEVAGRLVYLYFVGKGFRNKQIRKMAWAILAAGRGVV
SRRYVEELLERPRPGAVPSAPAEGLILLDIEYDVKFDVDRGELRKAYVYFLEKYRRLEAL
AAAYRAAGERLLFYDDL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgccttatctctaccgcgtcgcgtacgatggggcgcttttccacggcttcactggccac
tccaactccgtggaggcggcgcttaggcgcgtcttcggccatctgctgggccgggggagt
aggacggaccccggagtgtcggcggtgggcaacgccgtattggcgcctagccgcctgccg
ctggggtacataaactccaggttgccgaggggggtgtggacgtgggctgtggcagaggtg
ggggagggctttaacccgaggagggcccggcgtaggaggtacctctacgtggcgccccac
tggggggaggacgtggaggccatgagggaggtggccgagctgttcaaggggacgcacgac
ttctcttcctttatccagttcaggggggagagggggacgccgcctgtgaccacggtggat
gaggtgggggtggaggtggcggggcgcctcgtctatctctacttcgtgggcaagggcttt
agaaataagcagattaggaagatggcttgggctatcttggcggcggggcggggcgtggtg
tcgaggcgctacgtggaagagcttcttgaaaggccgaggcctggggctgtgccaagcgcg
ccggcggagggcctcatcctgctcgacattgagtacgacgtgaagttcgacgtggaccgc
ggcgagcttaggaaggcctacgtctactttttggaaaagtataggcggttggaggccctc
gcggcggcttatagggcggcgggggagcggctcctcttttacgacgatttgtaa
DBGET
integrated database retrieval system
