Pyrobaculum calidifontis: Pcal_1103
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Entry
Pcal_1103 CDS
T00483
Name
(GenBank) RNAse Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pcl
Pyrobaculum calidifontis
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcl03016
]
Pcal_1103
Enzymes [BR:
pcl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Pcal_1103
Transfer RNA biogenesis [BR:
pcl03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Pcal_1103
Prokaryotic type
Pcal_1103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
ABO08528
UniProt:
A3MV61
LinkDB
All DBs
Position
complement(1035855..1036718)
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AA seq
287 aa
AA seq
DB search
MPLLKLVFLGTGGAVPKADRMLPAIYLEDWLGHRVLLDAGEGAQYRLLQVGVSPASLTLV
AVTHGHEDHVLGLPGLVITSRFLGGKVRVLAPRSMHKALERLGVEVLEGYAAERLKITCV
EVCHTVDACGWLFEWDVGYKLDLQKATGLPKWALTSLIKGHPVEVEGRVIRPEDVADPAH
RRFKRLLYTGDTGPCPRMWETVGEVDVLIHEATFADDVESQKAHEEGHSTFADALEAARA
LRAKVLILTHISARYPDKSRHRQLAAQVTPPPHVYVPDDFDTLLVQL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgcctctcctgaagctggtctttctaggcactgggggcgctgtgcctaaggctgatagg
atgctcccggccatatacttggaggactggctagggcacagagtgctcctcgacgccggc
gagggggcacagtacagactgttacaggtgggggtgtccccggcctctctcacactggtg
gcagtcacccacggccacgaagaccacgtcttgggcctgcccggcctcgtgatcacgagc
cgcttcctgggaggcaaggtgcgggtgctcgccccccgctcaatgcacaaggcgctggag
aggctgggggtagaggtgctggagggctacgccgcggagaggctgaagatcacttgtgtt
gaggtgtgccacacagtggacgcgtgcgggtggctctttgagtgggacgtgggatacaag
ttggacttgcagaaggctacggggctccccaagtgggctctcaccagcctaataaagggc
cacccagtggaggtggaggggagggtcattaggccggaggacgtggccgacccggcccac
aggcggtttaagaggctgttgtacaccggcgacacggggccctgcccccgcatgtgggag
acagtgggcgaagtcgacgtgttgatccacgaggccacttttgccgacgacgttgagtcc
cagaaggcgcacgaggaggggcactccactttcgcagacgccctagaggcggcgagggcc
ctcagggcaaaggtcctcattttgacgcacataagcgcgcggtaccccgacaagagccgc
cacaggcaactggccgcacaagtgacgcccccaccccacgtctatgtgcccgacgacttt
gatactttgctcgtacaactttga
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