Pyrobaculum calidifontis: Pcal_1111
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Entry
Pcal_1111 CDS
T00483
Name
(GenBank) translation elongation factor 1A (EF-1A/EF-Tu)
KO
K03231
elongation factor 1-alpha
Organism
pcl
Pyrobaculum calidifontis
Pathway
pcl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Pcal_1111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcl03019
]
Pcal_1111
03016 Transfer RNA biogenesis [BR:
pcl03016
]
Pcal_1111
03012 Translation factors [BR:
pcl03012
]
Pcal_1111
04131 Membrane trafficking [BR:
pcl04131
]
Pcal_1111
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcl04147
]
Pcal_1111
Messenger RNA biogenesis [BR:
pcl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
Pcal_1111
Transfer RNA biogenesis [BR:
pcl03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
Pcal_1111
Translation factors [BR:
pcl03012
]
Eukaryotic type
Elongation factors
Pcal_1111
Membrane trafficking [BR:
pcl04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
Pcal_1111
Exosome [BR:
pcl04147
]
Exosomal proteins
Proteins found in most exosomes
Pcal_1111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
EF-G_D2
FeoB_N
Septin
Gtr1_RagA
NRD1_2
DUF6104
Motif
Other DBs
NCBI-ProteinID:
ABO08536
UniProt:
A3MV69
LinkDB
All DBs
Position
1043294..1044628
Genome browser
AA seq
444 aa
AA seq
DB search
MPSIVLPPKPTALQKPHINLAVVGHVDNGKSTLVGRLLYETGYVDEKAFKEIEEMAKKMG
KEDFAFAWILDRFKEERERGVTIEATHVGFETQKLFITIIDLPGHRDFVKNMIVGASQAD
AALFVISARPGEFETAIGPQGQGREHLFLIRTLGIQQLVVAVNKMDAVNYDQKRYEQVKA
EVSKLLKLLGYDPSKIHFVPVSAIKGDNVRTKSPNTPWYQGPTLLEVLDTFQPPPRPTDK
PLRMPIQDVFSITGAGTVVVGRVETGVLKVGDKVVIVPPAKVGDVRSIETHHMKLEQAQP
GDNVGVNVRGINKEDVKRGDVLGKVDNIPTVAEEIVARIVVLWHPTAIGPGYAPVMHIHT
ATVPVQIVELVSKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSDFPPLGRFA
LRDMGRTIAAGQILEVKPAQVQIK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctatagtactgccaccaaaacccacggcactacagaagccgcacataaaccta
gcagtggtaggccacgtggacaacggcaagtctacgctggtcggccgcctgctctatgag
actgggtacgtggacgagaaggcgtttaaggagattgaggaaatggctaagaagatgggt
aaggaggacttcgcatttgcgtggattctagatagattcaaagaggagagagagcgcggc
gtgacgatagaggctactcacgtgggctttgagacgcagaagctcttcatcacaattatc
gacttgccggggcacagggacttcgtgaagaacatgatcgtcggcgccagccaggccgac
gcggccctcttcgtaatctcggcgaggccgggcgagtttgagaccgcgataggcccacag
gggcagggaagagagcacttgttcttgataaggacgctgggtatacagcagttagttgtt
gctgtgaacaaaatggacgctgttaactacgatcagaagaggtatgagcaagtgaaggct
gaggtgtctaagctcctcaagctcctcggctatgaccccagcaagatccactttgtaccc
gtcagcgccattaagggcgacaacgtaagaacgaagtctcccaacacgccttggtaccag
gggccgacgcttctggaagttctcgacaccttccagccgcctcccaggcctacggacaag
ccgcttagaatgcctatacaggacgtgttctccatcactggcgctgggactgtggtagtg
ggcagagtggagactggggtgcttaaggtgggcgacaaggtggtcatagtcccgccggcc
aaggtgggcgacgtcagatctattgagactcaccacatgaagcttgagcaggcgcagccg
ggcgacaacgttggcgtaaacgtgaggggcattaacaaggaggatgtgaagcgcggcgac
gtgttgggcaaagttgacaatatcccaacggtggctgaggagatcgtggcccgtattgta
gttctctggcaccccacggcgattgggcctggctatgcgccagtgatgcacatacacacg
gccactgtgccagttcagatagtggagctggtgtctaagcttgacccacgtactggccag
gccgtggagcagaagcctcagttcattaagcagggcgacgtggccattgtgaaaatcaag
ccgcttaagcctgtggtggctgagaagttcagcgacttcccgccgcttggccgcttcgcg
ctccgcgacatgggtaggacaattgccgctggccaaatactagaggttaagccggcgcag
gtccagattaagtaa
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