Pyrobaculum calidifontis: Pcal_1160
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Entry
Pcal_1160 CDS
T00483
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
pcl
Pyrobaculum calidifontis
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcl03016
]
Pcal_1160
Enzymes [BR:
pcl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Pcal_1160
Transfer RNA biogenesis [BR:
pcl03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Pcal_1160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
SPL
DUF1450
Motif
Other DBs
NCBI-ProteinID:
ABO08585
UniProt:
A3MVB8
LinkDB
All DBs
Position
complement(1083471..1084793)
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AA seq
440 aa
AA seq
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MAKAYVEAFGCWLAKADAEVIRQRLGLVPVARPEDADVILVYTCAVREDGEVRQLARIRE
LAGLGREMIVAGCLARLRPHTVKSLAPHAELIYPSQVEGGREREMRVLPRFEGGLVYVVP
LQVGCLGNCTFCATKYTRGGAGYVKSADPDEVIRHVKKAVEGGAREIYLTGQDVITYGFD
ARWRSGWTLPDLLERLLREVDGEYRVRIGMSEPWVFERFADQILDIVKRDRRVYRYFHLP
VQSGSDRVLKAMGRRYTVDEYKELIRKIRRVLGEPVFIATDIIVGFPGEEWEDFLATVKL
VEELQFDKVHVARFSPRPFTEAAVMPRQVPDAEKKRRSKILSEVALRVAHLRNGARVGSR
DVVLITEVDHGLVVGRAGDYRQVVVKRGPGDGLLGQFVEVVVAGAGPVYLYGDVIGELVP
RGTSSTPSPSSFAQELATSS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaggcgtacgtcgaggcctttggctgctggcttgcgaaggctgacgcagaggta
attaggcagagactcggcctcgtccctgtggcaaggccggaggacgccgacgttatactt
gtctacacatgcgccgtgagagaggacggcgaagttagacagttggccaggataagggag
ttggcgggccttgggagagagatgattgtggctgggtgcctcgcccgcttgaggcctcac
actgtgaagagccttgcgccacacgccgagttgatctacccctcgcaggtggagggcggg
agggagagggagatgagagtcctcccacggtttgagggcggcctcgtctacgttgtcccc
cttcaagtgggctgtctggggaactgcaccttctgcgccactaagtacacgaggggcggc
gctgggtatgtcaaaagcgcagaccccgacgaggtgatacgccacgtgaaaaaggccgtg
gaggggggcgccagggagatctacctcacggggcaagacgtaattacgtacggctttgac
gcaaggtggaggagtgggtggactctgcccgacctcttggagcggctgttgagagaggtg
gacggggagtacagagtgcgcattggcatgtctgagccgtgggtctttgagcggtttgca
gaccagatattggacatcgtgaagcgcgaccggcgggtgtatcggtacttccacctcccc
gtccagtctggcagcgacagagtgctcaaggccatggggaggcgctacacggtggacgag
tacaaggagcttatacgcaagattaggcgcgtcttgggcgagccggtcttcatagccaca
gacataattgtgggattcccgggcgaggagtgggaggacttcttggccacggtgaagctg
gtggaggagttgcagtttgacaaagtccacgtggctcggtttagccctaggcctttcaca
gaggctgctgttatgccgcgccaagtgccggacgcggagaagaagcggcgtagcaaaatc
ctctcagaggtcgccctcagagtggcccacctcagaaacggcgcgagggtgggctctcgc
gacgtggtgttaataaccgaggtggaccacggcttagtggtggggagggccggcgactat
aggcaggtggttgtgaagagggggcccggcgacgggctcctgggccagttcgtcgaagtg
gtggtggccggggctgggcccgtctacctatacggcgacgtcataggagagcttgttccc
aggggtacttcttcgacgccttctccctcttcatttgctcaagagcttgcaacatcttct
taa
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