Pyrobaculum calidifontis: Pcal_1177
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Entry
Pcal_1177 CDS
T00483
Name
(GenBank) DNA-directed RNA polymerase, subunit M
KO
K03057
transcription factor S
Organism
pcl
Pyrobaculum calidifontis
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcl03021
]
Pcal_1177
Transcription machinery [BR:
pcl03021
]
Prokaryotic type
Archaeal type
Basal transcription factors
TFS
Pcal_1177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RPB9
Zn_ribbon_NUD
Zn_ribbon_TFIIB
Zn_Ribbon_1
FYDLN_acid
At4g08330
DUF7560
PSV_ORF131-like_dom
CpXC
DZR
Motif
Other DBs
NCBI-ProteinID:
ABO08602
UniProt:
A3MVD5
LinkDB
All DBs
Position
complement(1095506..1095775)
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AA seq
89 aa
AA seq
DB search
MRFCPKDGTLMVPVKKDGTTVLKCPKCGYEVKLTEKAKEGYRQRSEVSEEKKRGVMVAEE
RRQEYDQEEMEEMRRLLLENLQESERESD
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgcggttttgtcccaaggacggcacgttgatggtgccagtgaagaaggatgggaccact
gtgcttaagtgccccaagtgcggctacgaggtaaagctgactgagaaggcgaaggagggg
taccgccagaggtctgaagtctctgaggagaagaagcggggggtaatggttgccgaggag
agaagacaggagtacgaccaggaggagatggaggagatgaggaggctcctcttggaaaat
ttgcaggagagcgagagggagagcgactag
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