Pyrobaculum calidifontis: Pcal_1388
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Entry
Pcal_1388 CDS
T00483
Name
(GenBank) succinate dehydrogenase or fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pcl
Pyrobaculum calidifontis
Pathway
pcl00020
Citrate cycle (TCA cycle)
pcl00190
Oxidative phosphorylation
pcl00650
Butanoate metabolism
pcl00720
Other carbon fixation pathways
pcl01100
Metabolic pathways
pcl01110
Biosynthesis of secondary metabolites
pcl01120
Microbial metabolism in diverse environments
pcl01200
Carbon metabolism
Module
pcl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pcl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pcl_M00149
Succinate dehydrogenase, prokaryotes
pcl_M00374
Dicarboxylate-hydroxybutyrate cycle
pcl_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Pcal_1388
00650 Butanoate metabolism
Pcal_1388
09102 Energy metabolism
00190 Oxidative phosphorylation
Pcal_1388
00720 Other carbon fixation pathways
Pcal_1388
Enzymes [BR:
pcl01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Pcal_1388
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
DAO
HI0933_like
Thi4
Lycopene_cycl
GIDA
FAD_oxidored
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
ABO08808
UniProt:
A3MVZ1
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All DBs
Position
1302196..1303938
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AA seq
580 aa
AA seq
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MEVLSCDVVVVGSGLAGLRAAVAAAAASEKLSICVVTKVAGPRSHTISAEGGMAAVVHPE
KTGDTPHLHAYDTVKGGDFLVDQDAAMLLAQEAPSEALFLYKIGVPWNKDSDGTFSLRLF
GGMSKPRTLFVKDKTGFYILTALYKHAKSFSNIAFYEEHLVTKLVVKHNVFYGVTALDMR
RGEFKFFKAKAGVIATGGGGRMFKLTTMGYLNTGEVYGFALREGIALKDMEFVQWHPTAL
VPSGILISEAARAEGAYLVNKYGERFMRRYAPQKMELAPRDVIARAIAMECMSGRGFTWR
DGTCYVGLDVRHLDPARVKERLPLLLELSKTYAGVDPFTELIPVAPAVHYFMGGIHTDLY
GRVLTVSGEWVRGLWAAGEAAAVSVHGANRLGSNSLAECAVWGRLAGEQAAEYAKGRGEG
EADGAVKALVEREENRVFYKLGRKEVGGTSAAAIRSALQNAMHKGAGIIREESALAQALS
EVAKLISAFKEVNLHDTGRIYNMELREMVELDGMLLAAHAVLLGAYFRRESRGAHYRVDH
PQRDDKTWLKHTLVHKVGEGFGVYYAPVKVDKWPPEVRAY
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggaagtattatcttgcgacgtagtggtggtgggctcgggactggcgggcctgcgggcc
gccgtggccgccgcggcggctagcgagaagctctccatctgcgtagtcaccaaggtggcg
gggccccggtctcacaccatctcagccgagggcggcatggcagccgtggtgcacccagag
aagactggagacacgccgcacctccacgcctacgacactgtgaaaggcggcgacttcctc
gtggaccaagacgcggccatgttgctcgcccaagaggcgccgtccgaggcccttttcttg
tacaagataggggtcccctggaataaggactcggacgggaccttctccctcaggctcttc
ggggggatgagcaagcccagaaccctctttgtaaaagacaagaccggcttctacatacta
accgccttgtacaagcacgccaagtctttctccaacatcgccttctacgaagagcacctg
gtgaccaagctggtggttaaacacaacgtattctacggcgttactgctctagacatgagg
aggggggagttcaagttcttcaaggccaaggccggggtaatagccacggggggcggcggc
cggatgttcaagctcaccaccatgggctacttaaacactggggaggtgtacggcttcgcc
ctccgggagggcatagcgttgaaagacatggagtttgtccaatggcaccccacggctctc
gtccccagcggaatcttgatcagcgaggcggcccgggccgagggggcctacctcgtgaac
aagtacggcgagaggttcatgaggaggtacgcgccgcagaagatggagctggcccccaga
gacgtaatagccagggcaatagccatggagtgcatgtcggggaggggcttcacctggcgc
gacgggacctgctacgtcgggctcgacgtccgccacctagacccagccagggtaaaggag
cggctccccctcctcctagagctctccaagacctacgcgggggtggaccccttcacagag
ctcatccccgtggcccccgcggtgcactacttcatgggcggcatacacacagacctctac
ggcagagttttgaccgtgagcggggagtgggttagggggctgtgggccgccggcgaggcc
gcggcggtgagcgtacacggcgcaaaccgcctaggctccaactccctcgccgagtgcgcg
gtgtggggcaggctggccggagagcaggcggctgagtacgccaaggggcggggggagggg
gaggcagacggcgcggtcaaggcgctggtcgagagagaggagaatagggtcttctacaag
ctggggaggaaggaggtggggggcacctcagccgcggccattaggtctgcgcttcaaaac
gccatgcacaagggggcaggcatcattagggaggagtcggcgctggcgcaggccctttcg
gaggtggcgaagctcatctcggcctttaaagaggtcaacttgcacgacactggcagaata
tacaacatggagctaagggagatggtggagcttgacggcatgctcctggccgcccacgct
gtgctcctaggcgcctactttaggagggagtcgaggggcgcccactacagggtggaccac
ccgcagagagacgacaagacttggcttaagcacaccctagtgcacaaagtgggagagggg
ttcggcgtctactacgcaccggtgaaggtggacaagtggccgcccgaggttagggcgtat
tag
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