Pyrobaculum calidifontis: Pcal_1637
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Entry
Pcal_1637 CDS
T00483
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pcl
Pyrobaculum calidifontis
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcl03400
]
Pcal_1637
DNA repair and recombination proteins [BR:
pcl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pcal_1637
Archaeal homologous recombinant proteins
Pcal_1637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_13
AAA_15
AAA_21
AAA_29
GAS
DUF1664
DUF4549
AAA_27
Rad50_zn_hook
DUF7784
Motif
Other DBs
NCBI-ProteinID:
ABO09054
UniProt:
A3MWN7
LinkDB
All DBs
Position
1523135..1525522
Genome browser
AA seq
795 aa
AA seq
DB search
MWRISRVELENFRSYRGAHRLELGDVNLLWGRIGAGKTSVFYAIEYALFGQQLEVKERVA
KLADLIHSGSHEARVALELVDGANVLKVERKLGKRGAEKLVVVHNGVELRGGEAERRLEE
LLGVDEDLYERLVYISHRTLEGFIYGTSQKRAISVDRLFGIDVIDGVVKTVSSAEKALLG
KAEELRKRLAAYEKYRDVIKRYGGYSGLVSRLRALSSEIEALKEREAMLTRTVEELARAR
AAYLAKLKEHEQILLEYYRARSELEFLESSAGGEVDVGALEKVKAALREAAEEFEHMLDP
GILEKLYKASDLEALSVAMAEVYDALTRVAKDLELELTDVKKAYEEYVARARRLEEEVAA
AEARLRRLEKPFLRFQELLKKLRSLEEARARLSEARRRLSEAEREAAYYTSLKTVALYLA
ETNASVCPICGSPISREAVEKVVRDIDEKFGGVVKRVEELREEVKALEREVEEMEILQGD
AAEYIAAKARLDELKVEREEVVKKVLQAEKSVRQLEKRIEKLREFFAKVDKRVISDAVSR
YGRAVRIRELRKRVKELEERLRQAGIGGEELEVEVKWREAAAELEKAAARLAELYKEKSL
LEEAAREVGEEAEGLKKRLDNVLYAYGRLEELKSRLELAKVSARARLVEVVRSRFNEVFQ
SLYKYGDVVKVDAAVEPSRGYYDFYAISPSGDRYGVSRLSDGQRLSIALSLALALREISQ
VKLGFLIFDEPIPYVDVNVRKAFAQLLTSLAGRYQLLVATQSREFAEEVREALPNAKLFT
VVKDGASALIEGLQS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtggcggatatcgagagttgagctggagaacttccgctcgtataggggagcgcacagg
ctggagctaggcgacgtcaatttgctgtggggcaggataggcgctgggaaaacctccgtt
ttctacgccattgagtacgccttgtttggccaacagcttgaggtcaaggagagggtggcc
aagctagccgacttgatacactcggggtctcacgaggctagagtggctctagagctggtg
gacggggccaatgtgcttaaggtggagaggaagctgggaaagcggggagcggagaagctc
gtcgttgtgcacaacggcgtagagctcagaggcggcgaggcggagaggaggctggaggag
cttttaggcgtagacgaggatttgtacgagcggttggtatacatttctcacaggacgctg
gagggctttatctacggcacctctcagaagagggcaatctcggtggataggctcttcggc
atcgacgtgatagacggcgtagttaagaccgtctcctcggccgagaaggcgctgttgggg
aaggcggaggagctgaggaagaggctggcggcttatgagaagtaccgggatgtgattaag
aggtatggtggctactcggggctagtgtctaggcttagggctctgagctccgagattgag
gcgctgaaggagcgggaggctatgttgacgaggacggtggaggaacttgccagggcgcgg
gcggcgtatttggcgaagctgaaggagcacgagcagattctactggagtactacagggcc
aggtctgagctcgagtttttggagtcctccgcggggggcgaggtagacgtgggcgcgctg
gagaaggtgaaggccgcgcttagggaggccgctgaggagtttgaacacatgcttgaccca
ggcatattggagaagttgtacaaggcgtccgacctggaggccctctcggtggccatggcc
gaggtgtacgacgcattgactagggttgcaaaagacttggaactcgagctgaccgacgtg
aaaaaggcctatgaggagtatgtggccagggcgaggagacttgaggaggaggtggccgcg
gctgaggcgcggctgaggagattggagaagccgtttttgcgctttcaagagcttttaaag
aagcttcgctctttggaggaggcccgggcgaggctaagcgaggccaggcgtaggcttagc
gaggcggagagagaggcggcgtattacacgtctctcaagactgtggcgttgtacctagct
gagacaaacgcctctgtttgcccaatatgcggctcgcctataagcagagaggccgtagag
aaagtagttcgggatatcgatgaaaagttcggcggcgtagtgaagagagtggaagagcta
cgggaggaggttaaggcgctggagagagaggtagaggagatggagatcctccagggcgac
gcggcagagtacatagccgcgaaggctagactggacgaattaaaggtagagagagaggag
gtggtgaaaaaggtgttgcaggctgagaagtcggttaggcagttggagaagagaattgag
aagttgcgcgagttttttgcaaaagtggacaagcgtgtcatctcagacgccgtctctagg
tatgggagagccgtgaggattagggagcttaggaaaagggtcaaagaacttgaggagagg
ctgaggcaggcggggatagggggagaggagctcgaggtggaggtcaagtggagggaggcg
gcggctgagcttgaaaaggcggcggctaggctagccgagttgtacaaggagaagagcctc
ttggaggaggcggcgcgggaggttggggaggaggcggaggggctgaagaagaggctggac
aacgtgctgtatgcgtatggaagactagaggagctcaagtcccggcttgagttagccaag
gttagcgcaagagctaggcttgtggaagtggtgaggagccgtttcaacgaggtgtttcaa
agcttgtataagtatggcgacgttgtgaaagtggacgcggcggtggagcccagcaggggg
tactacgacttctacgccatttctccctccggcgatagatatggcgtctcccggctgagc
gatgggcagaggctgtcaatagccctctccctggccctagcgttaagagaaatctcccag
gtgaagctcggcttcttaatcttcgacgagccgataccctacgtcgatgtaaatgtgaga
aaggccttcgcccaacttctcacatcgctggctgggcgctaccagctcctagtggccacc
cagtctagggagttcgcggaggaggtcagagaggctttgccaaacgcaaagctgttcacc
gttgtgaaagacggcgcctctgcgctgatagaggggttacaaagctga
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