Pyrobaculum calidifontis: Pcal_1734
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Entry
Pcal_1734 CDS
T00483
Name
(GenBank) Transcription initiation factor IIB (TFIIB)
KO
K03124
transcription initiation factor TFIIB
Organism
pcl
Pyrobaculum calidifontis
Pathway
pcl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Pcal_1734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcl03021
]
Pcal_1734
Transcription machinery [BR:
pcl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Pcal_1734
Prokaryotic type
Archaeal type
TFB
Pcal_1734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_Ribbon_TF
TFIIB
Zn_ribbon_RRN7
MarR_2
Lar_restr_allev
DUF7567
Zn_ribbon_3
Zn_ribbon_LysW
Zn_Ribbon_Prim
Zn_ribbon_8
Complex1_LYR_1
Ribosomal_S27e
Cyclin_C
Zn_ribbon_IS1595
Zn_ribbon_SprT
FtrD-like
Motif
Other DBs
NCBI-ProteinID:
ABO09151
UniProt:
A3MWY4
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All DBs
Position
1614565..1615461
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AA seq
298 aa
AA seq
DB search
MTRRLIFEVEEYRCPVCGSDKNIVIDYEGGQIICKNCGTVLKEGVADLGPEWRKPEASRA
YAGPIGSSIGDIERGNVKITDKLRAIMLGKFSKPMSTPLERLELDAREFFESARVRIGLP
KVVVDEAVALYREVYKAGFRAPRIEGYAAVLYFVAKRHGLASVTLKALTEKLGIDRSALI
SAYMELMKVALSLGIRPPKADPKIYIPRIVASLGIGDEKSAEVQRVAVDILRYIISSPRI
RNGRKPQVLAAAAVYYACFIAGVEVTQKELARAADSTEGPIRELLRELADKLYIELTV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgacccggagacttatcttcgaggtggaggagtatcgctgccctgtgtgcggcagcgac
aaaaacatagttatcgactacgagggggggcagataatttgtaaaaactgtggaactgta
ctaaaggagggagtcgccgacttgggcccagaatggaggaagcctgaggcgtctagggct
tatgcagggcccataggatcctccattggcgatattgagcgtggaaatgtgaaaatcacg
gataagctcagggccataatgcttggcaaattctcaaagcctatgtcgacgccgttggag
cgccttgaattagatgctagagagttttttgaaagtgccagagttagaattggcctccct
aaggtggttgtagacgaagctgtggctctgtatagggaggtgtataaggcgggctttagg
gctcctaggatcgaggggtacgccgccgtgttgtactttgttgcaaagaggcatgggcta
gcttcggtgactctaaaggctttgacggagaagttgggcattgataggtcggcccttatc
tctgcttatatggaacttatgaaggtggcgctaagcctcggcattaggccgccgaaggca
gatccaaagatctacataccgagaatagtcgcgtcgctcggcataggagatgagaagtct
gcagaggtgcaacgcgtggctgtagacattttgcggtacataatatcctcgccgcgtatt
agaaatggtagaaagccccaagtcttggccgcggcggccgtctactatgcatgtttcatc
gccggcgttgaagtgactcagaaagagcttgcgagagctgcagactccacggaggggcct
attagggagctcttgagagagctagccgacaagctctacatagagctcaccgtgtag
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