Pyrobaculum calidifontis: Pcal_1736
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Entry
Pcal_1736 CDS
T00483
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pcl
Pyrobaculum calidifontis
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcl03016
]
Pcal_1736
Enzymes [BR:
pcl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Pcal_1736
Transfer RNA biogenesis [BR:
pcl03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Pcal_1736
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
DUF6276
Motif
Other DBs
NCBI-ProteinID:
ABO09153
UniProt:
A3MWY6
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All DBs
Position
1615930..1616490
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AA seq
186 aa
AA seq
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MSVRSFVAIDIENPDVVKKIEEFQREVAKLGLDIKFVEKENLHITLRFLGEIPQSRVNDV
VRALSSLRFTRFSMRLSGVGVFPDLSRPRVLWIGVSQGAEELSRVAAAVRAAVDKYAEHV
EERDFTPHLTVGRLKSSRNVERLRDLVARYNGVEFGVVEVTSIKLKKSVLTPRGPIYSDL
FTLNLT
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgaggagttttgtggctattgacatagaaaatcccgacgttgtgaagaagatt
gaggagtttcagagggaggtcgccaagcttggcttagacatcaagtttgtggaaaaggag
aacctccacattactctgcggtttctcggcgaaatacctcaaagccgcgtaaacgacgtt
gttagggccttgtcttcgttgagatttacgcgtttttctatgaggttgagcggagtcggg
gtcttccccgacttgtcaaggccgcgggttttgtggataggcgtgtcgcagggcgcagag
gagctttcgagggttgccgccgccgttagagcggccgtggataagtacgcggagcatgtc
gaggagagagattttacgccgcatctcactgtgggcaggttgaagtctagtcgaaacgtg
gaaaggcttagggaccttgtcgcacgctacaacggcgtagagtttggcgttgtggaagtg
actagcattaagctgaagaagtccgttcttactccgcgtggacctatttatagcgactta
tttacgctaaatcttacgtga
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