Pyrobaculum calidifontis: Pcal_1831
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Entry
Pcal_1831 CDS
T00483
Name
(GenBank) LSU ribosomal protein L24A
KO
K15172
transcription elongation factor SPT5
Organism
pcl
Pyrobaculum calidifontis
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Pcal_1831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcl03021
]
Pcal_1831
03019 Messenger RNA biogenesis [BR:
pcl03019
]
Pcal_1831
Transcription machinery [BR:
pcl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Pcal_1831
RNA polymerase I system
Pcal_1831
Messenger RNA biogenesis [BR:
pcl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Pcal_1831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
Motif
Other DBs
NCBI-ProteinID:
ABO09248
UniProt:
A3MX81
LinkDB
All DBs
Position
1694862..1695326
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AA seq
154 aa
AA seq
DB search
MSSERCPVFTVSVVSRQEYNIVMLLKMRVESGKLPIYAIVVPPESFGVLFIEGESLPVVS
RAVYGVKHVKGVMRGITNVEEVMRVLKPPKPTVEIDVNDEVEITADVLKGSRARVTFVDR
EKGIVRVELLDSAFPMPLDLKITEVKLVKKAGQQ
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgagaggtgccctgttttcacagtaagcgtcgtctcgaggcaggagtacaac
atcgtgatgctgttgaagatgcgggtggagtctggcaaattgccaatttacgccattgtg
gtaccccccgagtcgttcggcgtgttgttcattgagggagagtctttgccggttgtcagc
cgcgcggtgtatggagtgaagcacgtaaaaggggttatgcgcggtataacaaacgtggag
gaggtgatgagggtactcaagcctcccaagccgaccgtcgagatcgacgtcaacgacgaa
gttgagataaccgccgacgtattaaagggcagtagggccagggtgacctttgtcgacaga
gaaaagggcattgtacgcgtcgagctcctagacagcgccttccccatgccgctcgacttg
aagatcacggaggtgaagctcgtaaaaaaggcggggcaacaatag
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