Pyrobaculum calidifontis: Pcal_2040
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Entry
Pcal_2040 CDS
T00483
Name
(GenBank) RNA-binding protein AU-1
KO
K22469
ribonuclease FAU-1 [EC:3.1.26.-]
Organism
pcl
Pyrobaculum calidifontis
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcl03009
]
Pcal_2040
Ribosome biogenesis [BR:
pcl03009
]
Prokaryotic type
rRNA processing factors
Pcal_2040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF402
Motif
Other DBs
NCBI-ProteinID:
ABO09455
UniProt:
A3MXT8
LinkDB
All DBs
Position
1893980..1895326
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AA seq
448 aa
AA seq
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MKVRIRGIFATALTKLALDWGFSIVQPTGKIVERFDLPVDNSPPDVTVIDHESKSGVVVL
GKCGAVEAFVERLREAVDPVVVKADLGVHDVFVGKVVGEGRVEGPGGIVLRVPPRFAPTV
GSVGVFTVVRPPLGPVEGVAVPDIIVEGDYVELSTSPGVRFSRHIPEGERVRLRLLAETR
LGWLGGLGVRFKSSARFAEDEAVVREAEALYRELVELAKGGEAGAVLRRGRCLALALFDK
AAKERLDEVRRSVVPTARGHHALRAQGLGKCLDLLDYLGVEAYERAAEFLARGAVEIWHI
KPWGEMVKMRGEAVGVFGDWLVVKRPLRPGGVLDGIGVKIERGFYALTCVPRRGNYVVHT
YYTPEGRAVGTYINVNSEPEWGRRIIYIDLLVDVAYVGGEAKVLDLEEYRRYEDVFPARL
RPPSGVLSPPVACGERGIIEAPPQSASS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggtgcggatccgcgggattttcgccacggcgttgacgaagttggcgttggactgg
ggtttttccattgtccagcctacggggaagattgtggagaggtttgacctgcctgtggac
aactcgccgcctgacgtcactgtgattgaccacgagtcgaaaagtggggttgtcgtgctg
gggaagtgcggcgccgtggaggcctttgtggaaaggcttagagaggcggtggatcccgta
gtagttaaggcggatctgggcgtacacgacgtgtttgtgggcaaagttgtgggcgagggg
cgcgtggaagggccggggggcattgtgctgagggtaccacctcggtttgcgccgacggtg
gggtccgtgggagttttcaccgtggtgaggccgcctctcggcccagtggagggcgtggcc
gtccccgacatcatagtcgaaggcgactacgtggagctcagcacttcgccaggggttagg
tttagccgccacattccggagggggagcgggtgaggcttaggctcctcgccgagaccagg
ctgggctggctggggggcctgggggtgaggtttaaatcgtcggcgcggttcgcggaggat
gaggccgttgttagagaggcggaggccctctacagagagctggtggagctggctaagggg
ggagaggcgggtgctgtgcttaggcgtgggcggtgtctggcgctggcgctgttcgacaaa
gcggcgaaggagaggctggacgaggttaggaggtcggtggtccccacggcgcgtggccac
cacgcgcttagggcacaggggctcggcaaatgcctcgacctactcgactatttgggcgtg
gaggcctatgagcgggcggccgagtttttggctaggggggctgtggagatttggcacata
aagccctggggagagatggtgaagatgcggggagaggcggtgggcgtcttcggcgactgg
ctagtggtcaagaggcctctcaggccgggcggcgtcttagacgggattggggttaagatt
gagagggggttctacgcccttacctgtgtgcctaggcgggggaactacgtggtccacacc
tactacacgcctgaggggagggccgtggggacgtacataaacgtcaactcagagcccgag
tggggcaggcggattatatacatcgacctcctcgtagacgtggcgtacgtcggcggcgag
gccaaggtgctggacctggaggagtacaggaggtacgaggacgtcttcccggcgaggctt
aggcctcccagcggggtcctgtccccgccagtggcctgcggagaaagggggattattgaa
gctcctcctcagtccgcctcctcttaa
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