Pyrobaculum calidifontis: Pcal_2076
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Entry
Pcal_2076 CDS
T00483
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pcl
Pyrobaculum calidifontis
Pathway
pcl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pcal_2076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcl03400
]
Pcal_2076
Enzymes [BR:
pcl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Pcal_2076
DNA repair and recombination proteins [BR:
pcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pcal_2076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABO09491
UniProt:
A3MXX4
LinkDB
All DBs
Position
1924629..1925213
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AA seq
194 aa
AA seq
DB search
MYTLEQLHEEIKRCTRCPLHKTRRNAVPGEGSGRLGIMIVGEAPGSSEDEQGRPFVGAAG
SLLNKTLSTLGVERGDLYITNVVKCRPPGNRTPTREEVAACLPYLLRQIEILRPRRIIAL
GAVSAGALLGLIGRQVERVGDVRGKCFRGKVAGVDVEICVTYHPAAVLRNPRLRGTFAED
LAAFLGGGGLERYF
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
gtgtatacgcttgagcaactacatgaggagataaagaggtgtacaaggtgtccactgcac
aagactaggcgcaacgctgtccctggcgaggggagtggaagacttggcataatgatagtc
ggcgaggcgccgggctccagcgaagacgagcaaggcagacccttcgtgggagcggcgggc
agtctgttgaacaagacgttgtcgacgctaggcgtagagaggggggacctctatattaca
aacgtggtgaagtgcaggccgccgggaaacaggacgcctacgcgcgaggaggtggccgcc
tgtctaccatatctactgcgccagatagagatattgaggcctaggcgcataattgcgctt
ggcgcagtaagcgccggcgcactcctggggctcattgggcgccaagtggaaagagttgga
gatgtgagaggcaagtgtttccgtgggaaagtggcgggcgttgacgtagagatctgtgtg
acatatcacccagcggcagtccttagaaacccaaggcttagagggacgtttgcagaagac
ttggcggctttcctaggcgggggagggcttgagcggtacttctaa
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