Pyrobaculum calidifontis: Pcal_2091
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Entry
Pcal_2091 CDS
T00483
Name
(GenBank) DNA-directed RNA polymerase, subunit B' / DNA-directed RNA polymerase, subunit B'
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
pcl
Pyrobaculum calidifontis
Pathway
pcl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pcal_2091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcl03021
]
Pcal_2091
Enzymes [BR:
pcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pcal_2091
Transcription machinery [BR:
pcl03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Pcal_2091
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
ABO09506
UniProt:
A3MXY9
LinkDB
All DBs
Position
1936786..1940169
Genome browser
AA seq
1127 aa
AA seq
DB search
MVDLLPLPILSKDGDGEFPSRDDRWALVERFIKDKGLANHQIKSFNDFLDKRLPRIVEEF
KVVETEIKGLKLVLEKIEVGWPRIKESDGSESLIYPMEARLRNATYAAPLYLTATLYVDD
EPYVTETFYIGELPIMVKSKRCNLTRLKPSEYAKKFEDPQDFGGYFIINGSERVIISQED
LVTDRPIYDVGDKPSVKFLAKTISTGIGYRSTLTVELNKDGVIYVTLSAMPVKIPFPIYM
KALGLETDEDVVKAVSDDPDIQKELLPSLIAANQVAITREDALDYIGGKVAVGQPRPVRI
ERALQLLDRYFLPHLGTTTPDEKKQQEIRLKKALMLGQIVKGLVELQLGRRKPDDKDHVG
NKRVRLVGDLMTQLFRTVFKQFLQELRSQLEKYYARGRIPHIQTIVRPDIITERVRQALA
TGNWVGGKTGVSQILDRTNYLSTLSYLRRVVSSLSRTQPHFEARDLHPTQWGRLCAVETP
EGQNVGLVKNLALLAEITTGVDEREVEQLLYNLGTVPVLKAREDGIRGAEVYLNGRLIGI
HPNAEELVATVRSLRRQGKISDEINIAHINGSVLVNCDGGRIRRPLLVVENGRLKLTKDI
VERVRKGDLTWDDLVKMGVVEYLDADEEENAHIAVDPRGDLSGYTHVEIIPSAILGAIAS
IIPYLEHNQSPRNQYEAAMAKQSLGLPQSNFLYKLDSRGHMLYYPERPIVTTRGLELVGY
SKRPAGQNAVVALLTYTGYNIEDAVILNKASVERGMFRSVFYRTYETEEQKYPGGEEDRI
EVPDSSVKGYRGPEAYSHLDEDGIAPPEVYVSSNEVLIGKTSPPRFYTTLETERILKERR
DASVAVRRGEKGIVDRVIITESPEGNKLVKVRLRELRIPELGDKFASRHGQKGVVGMLLR
QEDMPFTEDGIVPDIIVNPHALPSRMTVGQLLESIAGKVGAATGQLVDATPFEGVGEEDL
RKLLLKLGFRWDGKEVMYSGITGEKLVADIFIGIVYYQKLHHMVADKIHARARGPVQILT
RQPTEGRSREGGLRLGEMERDVLIAHGASALLYERLVESSDKYVMYVCELCGLPAYLDAK
TNKPRCPIHGDTGQFAKVVVPYAFKLLLQELMALGIYPKLELSEVLD
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacttgctccccctcccgatactctctaaggatggcgatggtgagtttccttcc
cgggacgacaggtgggcgcttgttgagagatttattaaagataaggggcttgcgaatcac
cagataaaatcgtttaacgattttctagacaaaaggctaccgcgcattgttgaagagttt
aaggttgtcgaaactgagatcaaggggcttaagctggtattggaaaagatcgaggtgggg
tggcctaggataaaggagagcgacggctctgagtctttgatataccccatggaggctcga
cttagaaatgccacctacgccgcgcctctttatctcaccgcgacgctgtatgtcgatgac
gagccttatgtcaccgagactttttacataggtgagttgcctattatggttaagtctaag
aggtgtaacttgacgaggctaaagcccagcgaatatgcgaaaaagttcgaagacccgcag
gattttggagggtacttcatcatcaacggcagtgagcgcgttataatctcacaggaggac
ttagtaacagacaggccaatatacgacgtaggcgataagccttctgtaaaattcctagca
aagacgatctccacggggattgggtataggagtacattgaccgtggaactgaataaagac
ggcgttatatacgtcacgctttccgcaatgcctgtaaaaatcccgttcccaatatacatg
aaggccttaggcctagagacggatgaagatgtggtgaaagctgtctcagacgaccccgat
attcagaaagagcttctcccctcgcttatcgcggcgaatcaggtggctataactagggaa
gacgcgctcgactacataggcggcaaagttgcagtgggccagccgcggcctgtgagaatt
gagcgtgcgcttcagttgttggataggtacttcctcccgcaccttggcacaactacccca
gacgagaagaagcaacaggaaattaggctaaagaaggcgcttatgctaggccaaatagtc
aaagggcttgtcgagcttcaacttggccgtagaaagcccgacgataaggaccacgtgggg
aacaagagggttagacttgtcggtgacttaatgacgcaactatttagaaccgtatttaag
cagtttctgcaagagctaaggagtcagcttgagaaatactacgctagggggaggatacct
cacatccagaccatagttaggccagacattatcactgagagagtgaggcaggcgctcgcc
acgggcaactgggttggaggcaagaccggcgtctcgcagatactagacagaacaaactac
ttgtccacgttgagctatctaaggcgagtagtctcgtcgctttcaaggacgcagccacat
tttgaggcccgcgacttacaccccacccagtggggcaggctgtgcgccgtcgagacgccg
gagggtcaaaacgtcggcctagtaaagaacttggcccttctcgccgagattaccacaggg
gtagacgagagagaggttgaacaactactgtacaacttggggactgtgcctgtgctcaag
gcccgcgaagacggcatacgcggcgcagaggtgtatctcaatgggcggctcatagggatt
caccccaacgccgaagagcttgtcgccactgtgagaagccttaggaggcaggggaagata
agcgatgaaatcaacatagcccacataaacggctctgtactggtcaactgcgacggcggc
cgcattaggcggcctctcctggtggttgaaaacggtaggctgaagcttacaaaagacata
gtggagcgcgtgagaaagggagacttgacttgggacgacttagtgaaaatgggcgtggtg
gagtacctagacgcagacgaggaggagaatgcacacatagctgtagaccccagaggggat
ctgtccggctacacgcatgtggaaataattccatcggccatacttggcgcaatagcctcc
ataatcccctacctagaacacaaccagtctccgcgcaaccagtacgaggcggcaatggca
aagcagtcccttggacttccgcagtccaacttcctctacaagctggattcgagaggccac
atgttgtactaccccgagaggcccattgtgacaactaggggacttgagctggtgggctac
tccaagaggccggctggccaaaacgccgtagtcgccttgttgacatacactgggtacaac
atagaagacgccgtaatcttaaacaaggcctctgtagaacgcggcatgttccgctcagtc
ttctaccgcacttatgaaacagaggagcagaagtaccccggcggcgaggaggacaggata
gaggtccccgacagctctgtcaaaggctacagagggcccgaggcctacagccacttagac
gaagacggcatcgcgccgcccgaggtctatgtgagcagcaacgaggtgcttattgggaag
acgtctccgccgaggttttacacaacgcttgagaccgagcgcattctcaaggagaggaga
gacgcgtctgtggccgtgcggaggggagagaagggcattgtggacagggtcatcatcact
gagtctcctgagggcaacaagctggtgaaagttagacttagagagcttagaatccccgag
cttggggacaagtttgcctcgcgccacggccaaaagggcgtcgtcggcatgttgcttagg
caggaggatatgccgtttacagaagacggcatagtgcccgacataattgtcaacccacac
gcgctcccctcgcgtatgaccgtgggccagctcctggagagcatagccggcaaagtgggc
gccgccacggggcaattggtagatgcgacgccgttcgagggcgtgggggaggaggacttg
aggaagttgttgttaaagctgggcttccgctgggatgggaaagaggtcatgtacagcggg
atcactggggagaagctcgtcgccgacatattcataggcatagtgtactaccagaagttg
caccacatggtggccgacaagattcacgcaagggcgagggggcctgtgcagatattgaca
aggcagcccaccgaggggcgttcgcgcgagggaggccttaggcttggcgaaatggagaga
gacgtcctcatagcgcacggcgcctctgcgcttttgtacgaaagactcgtcgagtcgagc
gataagtacgtcatgtacgtgtgcgagttgtgcggattgcccgcgtacttagacgctaag
acaaataagccgaggtgccccatacacggagacactggccaatttgccaaggtggtagtc
ccatatgcgttcaagctactgcttcaagagctaatggcacttggaatttaccccaagctt
gagctttccgaggtcttagactag
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