KEGG   Pyrobaculum calidifontis: Pcal_2117
Entry
Pcal_2117         CDS       T00483                                 
Name
(GenBank) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
pcl  Pyrobaculum calidifontis
Pathway
pcl03030  DNA replication
pcl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pcl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Pcal_2117
   03410 Base excision repair
    Pcal_2117
   03450 Non-homologous end-joining
    Pcal_2117
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcl03032]
    Pcal_2117
   03400 DNA repair and recombination proteins [BR:pcl03400]
    Pcal_2117
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pcl04147]
    Pcal_2117
DNA replication proteins [BR:pcl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Pcal_2117
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Pcal_2117
DNA repair and recombination proteins [BR:pcl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Pcal_2117
Exosome [BR:pcl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Pcal_2117
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc DUF5817_CT HHH_5 HHH_2 SAMD1_WH Transposase_32
Other DBs
NCBI-ProteinID: ABO09532
UniProt: A3MY15
LinkDB
Position
1960730..1961770
AA seq 346 aa
MGVTELGKLIGKEARREIKLESLAGKCVALDAYNALYQFLASIRQPDGTPLMDRAGRITS
HLSGLFYRTINLLEAGVKPVYVFDGKPPEFKLLEIEQRKKAKEKALEEVEKAIREGRRED
VAKYAKRAIFLTSEMVEDAKKLLTYMGIPWVQAPSEGEAQAAHMAKRGHCWAVGSQDYDS
LLFGSPRLVRNLAVSPKRKVGEEVVELSPELIELDAVLKSLKLKGREQLIDLAILLGTDY
NPEGVPGVGPQKALKLIWEFGSLEKLLQTVLKGVQFPVDPLKIREFFLNPPVTDQYSTEL
STPDERKIVELLVEEHDFSQERVAKALERLAKARGKVKTTSLDAFF
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgggcgttactgagctaggcaaactcattggaaaagaggctaggcgtgagataaagctg
gaaagtttggccggcaagtgcgttgccctcgacgcctacaacgcgctttaccaatttctc
gcgtctatccgccagcccgatggaactccgcttatggaccgcgcggggcgtataaccagc
cacctctccggcctattttaccgcacgataaacctactagaggcgggggttaagcctgtg
tatgtattcgatgggaagccccccgaatttaagctcctagagattgaacagcggaagaag
gccaaggagaaggctttggaagaggtggagaaggcaataagggaggggaggagggaagac
gtggccaagtacgcaaagagggcgatctttttgacgagtgagatggtggaagatgcaaag
aagttgttgacctacatgggtatcccgtgggtgcaagccccaagcgagggcgaggcgcag
gccgcccacatggccaagagggggcactgctgggccgtgggtagccaagactacgactct
ctgcttttcggttcgccccgcctagttagaaacctagccgtgtctcccaagagaaaggta
ggggaggaggtggtggagctctcgccagagttaatagagctagacgctgtgcttaaatcg
ctcaagctgaagggcagggagcagttaatcgacttggcgatactcttgggcacagactac
aacccagagggggtgccgggtgtggggcctcagaaggcgctcaagctcatatgggagttc
gggagcctagagaagctcctccagaccgtgctaaagggcgtgcaattccccgtagacccg
cttaagattagggagttcttcctaaacccgcctgtcacagatcagtacagcacagagctc
tctacccccgacgagagaaagatcgtggaactgctcgtcgaagagcacgacttctcacag
gagagagtggccaaggccttggaaagattggctaaggccagggggaaggttaagacaacg
tctctcgacgcgtttttctaa

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