Pyrobaculum calidifontis: Pcal_2147
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Entry
Pcal_2147 CDS
T00483
Name
(GenBank) Transcription factor IIE (TFIIE), alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
pcl
Pyrobaculum calidifontis
Pathway
pcl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Pcal_2147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcl03021
]
Pcal_2147
Transcription machinery [BR:
pcl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
Pcal_2147
Prokaryotic type
Archaeal type
TFE
Pcal_2147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_Ribbon_TF
Staygreen
TackOD1
Dimerisation
Ogr_Delta
Zf_2nd_IFT121
HypA
DNA_ligase_ZBD
Zn_ribbon_RRN7
wHTH-PRTase_assc
DUF4423
TrmB
DUF7129
Rio2_N
Zn_ribbon_LysW
Rad50_zn_hook
Motif
Other DBs
NCBI-ProteinID:
ABO09562
UniProt:
A3MY45
LinkDB
All DBs
Position
1984995..1985507
Genome browser
AA seq
170 aa
AA seq
DB search
MKDVYLYIVEKSVALEFDSAEYGRLARKTVELLYDRKEELTDDRIAILLNISTAETRRIL
QYLMKQNLVGVKKRSTEDYRIEYTWYVNDEVISQAVKYRAKVVREKISLMIKALTEEAFY
VCPNCFMRYPVEEVMERGGVCPICGSHLEYVENVEEINKLTKVFEKLDKI
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacgtgtatctttacatagttgaaaaaagcgtagcgcttgagttcgactcagcc
gaatacggcagattggcgaggaagaccgtggagctcctctatgataggaaggaggagctc
accgacgaccgaatcgcaatcctcctcaacatttcaacagccgagacgaggagaatccta
cagtacttaatgaagcagaacttagtcggcgtgaagaagaggagcacagaggactatagg
atcgagtatacgtggtatgtaaacgacgaggtgatatctcaagcagttaagtatagggcg
aaggtcgtgagagaaaaaatttcgcttatgataaaggctttgacagaggaggccttctac
gtctgtccaaactgcttcatgcggtaccccgtcgaagaggtcatggaacggggaggagtg
tgcccaatatgcggctcacatctcgagtacgtggaaaacgtagaggagataaataagctc
accaaagtctttgaaaaactagacaagatatga
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integrated database retrieval system
