Procambarus clarkii (red swamp crayfish): 123744858
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Entry
123744858 CDS
T07930
Symbol
Cbp80
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03013
Nucleocytoplasmic transport
pcla03015
mRNA surveillance pathway
pcla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123744858 (Cbp80)
09122 Translation
03013 Nucleocytoplasmic transport
123744858 (Cbp80)
03015 mRNA surveillance pathway
123744858 (Cbp80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123744858 (Cbp80)
03041 Spliceosome [BR:
pcla03041
]
123744858 (Cbp80)
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
123744858 (Cbp80)
Spliceosome [BR:
pcla03041
]
Common components
Common spliceosomal components
Cap binding complex
123744858 (Cbp80)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Kazrin
Motif
Other DBs
NCBI-GeneID:
123744858
NCBI-ProteinID:
XP_045581001
LinkDB
All DBs
Position
70:complement(26843096..26859798)
Genome browser
AA seq
789 aa
AA seq
DB search
MSRRKFDEMSDYDSGRDRKRRRTDAVEIEDRLESLIIRVGEKSTSSLESNLEGLASVLEA
DINNYKSKILKILSDCAVKMPEKTTIYTTLVGLLNAKNYNFGGEFVDMMARKLKEALKAC
MWKTARYVLRFFSDLVNCHVISTNSLLQLLHTFLDTARDDNSPQVRSDTYVYAVLSCLPW
VGRELYEKKEQDLERLLKHIEIYVRKRSRKHVPGLRVWRSDRPHPQEEYLDCLWAQICKL
RSDMWQEKHIARPYVAFDSILCEALQHNIPPLTLPPHHVDNTYPFPWVVFRLFDYTDCPE
GPVLPGAHSIERYLIEEHLHNIIKEYHLERKQCAAFLLDFPLKHKIPLEYMIVEVVLAEL
FHLPGPRYIEICYGSLLIELCKLQPATMPQVLAQAVELLFDRIDTMNVCCFDRFVNWFSY
HLSNFQFKWSWDEWLEASQLDGMHPRAKFIIEVLQRAMRLSYRQRIAEVVPEQFDCFVPH
KPEPIYKYANADASDIPGADAAHRLEAVVRAKGTSTEVIQTLNELPNPLRENDETDPPYN
PIQIQVFVQTLLHLGSKSFSHAFAGISKFLKVFESVVGSNEEAQILVLREMHEVWVHHQQ
MMVMLTDKFLRTQIVSCASVANWMFSKEMLPEFTKNYIWEIIHATIRKMNKHVGRLQREV
SDARERRAGNDSDDSSSDDEEQRPRPTEEEIERMEEKLEAAQADQKNLFLIIFQRFIMIL
SEHLVRCDTDGRDFNTHWYRWTIGRLHQIFMMHNTQVERYSQTLSTLLFTQDLDPHILDA
FNQFVALRS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccgcaagttcgacgaaatgtccgattacgactcgggtcgtgatcggaagagg
cggcgtactgatgctgtagagattgaggatcgtcttgagtccttaattattcgtgtagga
gaaaagagtacatcatccctggagagcaatctggaaggtttggcaagtgttctggaggct
gacatcaataattataagagcaagattctcaagattcttagtgattgtgctgttaagatg
ccagagaagactaccatatacactactctggttggccttttaaatgctaagaactacaac
tttggtggagagtttgtagatatgatggcacgaaagctaaaagaagctctgaaagcttgt
atgtggaaaacagctcggtatgtactgcgattcttctctgacctggtcaactgtcacgtc
atatccaccaactcacttctgcagctgctacacactttcttggacacagcacgagatgac
aactctccccaagtccgtagtgatacatatgtgtatgctgtactgagctgtctgccatgg
gttgggcgggagttatatgaaaagaaagaacaagatctagaacgcttattaaagcacatt
gagatctatgttagaaaacgcagtcgcaagcatgtccccggcctcagggtgtggcgttca
gaccgacctcatccacaagaagagtacttagattgtttatgggcccagatctgcaagtta
cgttcagacatgtggcaagagaagcacatagctcgaccctacgttgcatttgactctatc
ctgtgtgaagccttgcagcacaacattcctcctctcacacttcctcctcatcatgttgac
aacacataccccttcccatgggtggttttcaggttgtttgattacaccgactgtcctgaa
ggtcctgtcttgcctggtgcccactccattgagcgttacttgattgaggagcacttgcac
aacatcatcaaagagtaccacctggaaaggaaacaatgtgctgcctttttgctggacttt
cctctgaagcacaagattcctctagagtacatgattgttgaagtagtgctggctgagctc
ttccacctgcctgggcctcgttacattgaaatctgctacggctcactcctgattgagctc
tgtaaactgcaacctgccaccatgcctcaggtgctggcccaagctgtagaactccttttt
gaccgcattgacacaatgaacgtatgctgttttgacaggtttgtaaattggttttcgtac
cacttgagtaactttcagtttaagtggtcatgggatgaatggctggaggcatcacagctg
gacggcatgcatccgagagccaagttcatcatcgaggtgctccagagagccatgaggtta
tcatatcgccagagaattgcagaagttgtccctgaacagtttgactgttttgtaccacac
aaaccagaaccaatatacaaatatgcaaatgctgatgctagtgatatacctggtgctgat
gctgcccatcgccttgaagctgtggttcgagcaaaaggaacttcaactgaggttatacaa
acgctcaatgagcttccaaatccacttcgtgaaaatgatgagacagacccaccatataat
cctattcagattcaagtctttgttcagacactacttcatcttgggtcgaaaagtttctct
catgcttttgctggaatttccaagtttctcaaggtttttgaatcagtagttggaagtaat
gaggaagctcaaatcttggtgttgcgtgagatgcatgaagtttgggtccaccaccaacag
atgatggttatgcttactgacaagttcctccgcacccagatagtctcctgtgcctccgtt
gcaaactggatgttcagcaaggaaatgttgccggagtttacaaagaattacatatgggaa
atcattcatgccactattcgaaagatgaacaagcatgtgggacgattacagcgggaagta
agcgatgcacgcgaacgtcgagcagggaatgattctgacgattcctcatcggatgacgaa
gagcagcgaccacgacccactgaagaggaaatagaaagaatggaagaaaaacttgaagct
gctcaggctgatcaaaagaatctttttcttatcatatttcagcgctttatcatgattctg
tcagagcaccttgtgcgctgtgatacagacggccgcgactttaacacacactggtaccgt
tggactattggcaggctccatcaaatcttcatgatgcacaacacccaagtggagcgctac
agccagaccctgagtaccctgctcttcactcaagatcttgacccccatattcttgatgcc
ttcaatcagtttgttgctcttcgttcataa
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