Procambarus clarkii (red swamp crayfish): 123745145
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Entry
123745145 CDS
T07930
Symbol
Atg4a
Name
(RefSeq) cysteine protease ATG4B isoform X2
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04136
Autophagy - other
pcla04140
Autophagy - animal
pcla04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
123745145 (Atg4a)
04140 Autophagy - animal
123745145 (Atg4a)
04136 Autophagy - other
123745145 (Atg4a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcla01002
]
123745145 (Atg4a)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123745145 (Atg4a)
03029 Mitochondrial biogenesis [BR:
pcla03029
]
123745145 (Atg4a)
Peptidases and inhibitors [BR:
pcla01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
123745145 (Atg4a)
Membrane trafficking [BR:
pcla04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
123745145 (Atg4a)
Mitochondrial biogenesis [BR:
pcla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123745145 (Atg4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
123745145
NCBI-ProteinID:
XP_045581413
LinkDB
All DBs
Position
10:42719877..42754217
Genome browser
AA seq
403 aa
AA seq
DB search
MIGRWVHRVPYRWCRYLVWIIQALDSYLYIIIGRLHKFSKMIACMTYEGAMSEPEDFPKS
EEPVWILGKEYSTQTDLEPLRNDVHSRIWLTYRRNFAQISDTTYTSDKGWGCMLRCGQMV
LAEALLRRHLGRDWIWTPPTSNETYLRIMGMFEDHKCATFSLHIISQLGVDEGKPIGEWY
GPNTVAQVMRKLTPFDEWNNFSVNVAMDNVVIMDEIRCSCQIEGDRIWRPLLLFIPLRLG
LSEMNPIYFSGLKKCFKMPQSLGLIGGKPNHASYFIGFMGDELVFLDPHTTQEAGSTGKK
RTEEEVELDKSYHCPYAQRMPFEHLDPSLALCFYCGSEKEFDDLCNRMRQELIDAEKTPL
FELVPTRPDYMKDDSSFEGASGINVEFEDHQFDSDDEEFEVLQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgattggaagatgggtccatagagttccatatcggtggtgcagatacctggtttggatc
atacaagctctcgattcttacctttatattattattgggcgacttcataaattctctaag
atgatagcgtgtatgacgtacgaaggggcaatgagtgaaccagaagacttccctaagtca
gaagaacctgtatggatcttaggaaaagagtactcaacacagacagacttggaacctctt
cgtaatgatgtacattcgaggatatggctaacgtatcggagaaactttgctcagattagt
gatacaacttacacatctgacaaaggctggggatgtatgttgcgttgcggacagatggta
ttagctgaagctcttctccgaagacatttaggcagagactggatttggactcctccaaca
tccaatgaaacatacttaaggatcatgggcatgtttgaggatcacaagtgtgctaccttc
tcactgcacatcatatcacaactaggagtggatgagggcaagccaataggagagtggtat
ggaccaaatacagttgctcaggttatgaggaaattgacaccatttgatgaatggaacaac
tttagtgttaatgttgcaatggacaatgtagtaattatggatgaaataaggtgcagttgc
caaattgaaggagatcgaatatggcggccactactactatttattcctctgcgtttggga
ctttctgaaatgaatcctatctatttctcaggccttaagaaatgtttcaagatgccacaa
tccttgggactcataggtggaaagcctaaccatgcatcatattttattggttttatgggt
gatgagttggtgttccttgatccccacacaacacaggaggctggaagtacagggaaaaaa
aggactgaagaagaagttgagttagataagtcgtaccactgcccttatgctcagcgtatg
ccctttgaacacttggacccttctcttgctttgtgcttttactgtggttcagagaaagaa
tttgatgatttatgcaatcgaatgaggcaagagctcatagatgctgagaagacgccactc
tttgaattggtccccaccagacctgactacatgaaggatgactcgtcttttgagggagct
tctggaattaatgtggagtttgaagatcaccagtttgattctgatgacgaagaatttgaa
gttctgcagtga
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