Procambarus clarkii (red swamp crayfish): 123745489
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Entry
123745489 CDS
T07930
Name
(RefSeq) ATP-dependent RNA helicase Ddx1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcla03041
]
123745489
03016 Transfer RNA biogenesis [BR:
pcla03016
]
123745489
Enzymes [BR:
pcla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123745489
Spliceosome [BR:
pcla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123745489
Transfer RNA biogenesis [BR:
pcla03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
123745489
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
SPRY
CMS1
Motif
Other DBs
NCBI-GeneID:
123745489
NCBI-ProteinID:
XP_069192405
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All DBs
Position
35:complement(34809871..34830499)
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AA seq
428 aa
AA seq
DB search
MAAFEEMGVLPEIAKAVEEMDWTLPTDVQNEAVPLILGGGDVLMAVETGSGKTGAFCLPI
LQIVWESLKDIQLGKTSKVTKEISPLWLMSFFDRDAGMAVTPDGLRCQSRDPKTWQGARC
TKGVTGKGKYYYEAVVSDEGLCRVGWATPQAALDLGTCKSGFGFGGTGKKSNCKQFDDYG
ESFGLRDVIGCYLNLDAMEMHYSKNGTDLGKAFTLRSEFKNAVFHPAVVLKNAEMSFNFG
ATEFKHPPKAGYVAVSQASKDCTVSSGVKGGGDKPQKLQNNAPHAVIIEPSRELAEQTLK
QVQMFRKHLDNPVVRDLLVVGGIPVKEQIAALNAGVDIVCGTPGRLEDLINTGQLSLQSS
KFFVLDEADGLLKQGHECLINNIYNSIPKITSEGKRLQMVVCSATLHSFEVKRMAIQRWS
GHPIWSDR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttttgaagaaatgggtgtactcccagaaatagctaaggctgtagaagagatg
gattggacgttgccaacggatgtccagaatgaggcagtcccacttattttgggaggtggg
gatgtgctcatggcagttgaaacaggcagtggcaagactggtgctttctgtcttcccatc
ctacaaattgtctgggaatcacttaaggatattcagcttggcaagacttcaaaagttact
aaagaaatatctcctctctggttgatgagcttctttgaccgtgacgcaggaatggctgtg
acacctgatggcttgcggtgccagtcacgggatcctaaaacatggcagggtgcccgttgc
accaagggtgtcactggcaagggaaaatattactatgaagccgttgtgtcggatgaaggg
ttgtgtcgtgtcgggtgggcaactcctcaggcagcattagatcttggaacatgtaaatcg
ggatttggatttggaggcactggaaaaaagtctaattgtaagcagtttgacgattatggt
gaatcttttggcctcagggatgtcattggttgctatctcaacctggatgccatggagatg
cattacagcaaaaatggcactgatttaggtaaagctttcacattacgaagtgaattcaag
aatgctgtcttccatccagctgtagttttgaagaatgcagagatgtctttcaattttggt
gcaacagagttcaagcacccacctaaagcgggatacgtagcagtgtctcaggccagcaag
gactgtactgtgagctcaggtgtgaagggaggtggagacaagccacaaaagcttcagaac
aatgctccacacgctgtcattattgagccttcaagagaactcgcagaacagaccctaaaa
caggttcaaatgtttcgcaagcatctagataatccagtggttcgtgaccttcttgttgtt
ggtggtatacccgtgaaggagcaaatagcagcactcaatgcaggtgtggatattgtttgt
ggtactccaggacgcttggaagatcttattaatacaggacaactctctctccagtctagc
aaattctttgtgttggatgaggctgatggacttcttaaacaggggcatgagtgtctcatc
aataacatctacaactccatacccaaaatcacatctgaaggcaagagactccagatggtg
gtctgttctgccaccctacattcctttgaagtgaagcgcatggcaattcaaaggtggtct
ggacacccaatttggtcagacaggtga
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