Procambarus clarkii (red swamp crayfish): 123745506
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Entry
123745506 CDS
T07930
Symbol
rdgB
Name
(RefSeq) protein retinal degeneration B isoform X7
KO
K24069
membrane-associated phosphatidylinositol transfer protein
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123745506 (rdgB)
Membrane trafficking [BR:
pcla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
123745506 (rdgB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IP_trans
LNS2_PITM1-3
PITM1-3
DDHD
Transthyretin
LNS2
Acid_phosphat_B
Abhydrolase_3
Motif
Other DBs
NCBI-GeneID:
123745506
NCBI-ProteinID:
XP_045582036
LinkDB
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Position
71:complement(8962219..9470173)
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AA seq
1308 aa
AA seq
DB search
MVLIKEYRIPLPLTVDEYRVAQLYMIAKKSRQESHGEGSGVEILVNEPYEDGPGPDGKGQ
YTHKLYHVGSHLPGWLKSLIPKSALSVEEEAWNAYPYTKTRFTCPFVEKFSIEVETFYYD
DAGNQENVFNLSKSEIKQREIDVIDVVKDQLYGADYVEEEDPRKYKSEKTGRGPLGDNWI
TEYWETCKGQPTPLSTGEAIMCAYKLCKVEFRYWGMQTKIEKFIHDIALRKTMLRAHRQA
WAWMDEWWGLTIEDIRNIENETQKLLAKKYGPMGDDEQEGEDDSATPEAGADIPQSPSVS
SDRTPNLEKLSKYSSFRTSNDLGEQSHVICDDEETVVKGIVNNNNNNNNVEGEENGRLSG
SSPRLQRRELNVSMDSVLTDETRKRGSWSRSGSRNTLNSQNQANWRMESIRRDSDTSGSE
EEFFDCQGSAIPIIKEDLEENAALNKWSSLELLPQDGDSQSTAGHAGNEDSIFSQAFMSR
VAAERHNRVLGRSMEASAPSSPSHSPSHQPGPCSTTVLLLVIHAGSVLDPTSDVTNKRSD
VTTFRGALESVMRQHYPQMVGHVAIRLVAAPAVCSDALNILSSLSPYGLDSSPVCGEVSG
GDSVPVGAVPLLATTVQEYDEAVTRTINATNAAYHEFLRSEEGQNFNGQVCIIGDSIGGV
LAYDVLCRAYEQHKFGSNSNIPEGEPPSPGEEIGENVRVYRKSISSDGAYHTELPHCRSV
SDSDYHYTRHLSAPFPRRRSSSSSDYSHCKLEFEVTDFFMFGCPLALVLVYRKMIITSDK
NCTIQRPACQQVYNLFHPTDPLAVRVEPLLSARFSLLTPVTIPRYTKYPLGDGIPTHLLE
CIQSNGGVFMDIGGTTGSPSLAGHTRRMSDASILSTVSGMGDTVPIATINALSQRWWGSK
RLDYALYCPEGLANFPTNSLPHLFHASYWESSDVIAFILRQLVRTDQAALAADDKDLPVF
SPMQPREKWIKKRTSVKIKNVAANHRGNDVLVREGAPQSLQARFMYGPLDMVGLSGEKVD
IHIMRDPPGGDWQQISTEVTDKNGRIAFTIPPDKALSCGMYPVKMVVRGDHTSATHYLTV
VPPNTECVVFSIDGSFTASVSVTGRDPKVRAGAVDVVRHWQELGYLIIYVTGRPDMQQQK
VVSWLAQHNFPHGLVSFADGLSRDPLGHKADYLRVLIQDHAVVIMAAYGSAKDINVYSSI
GLKPEQIYIVGKASKKQQALAQVLTDGYAAHLSSLSALGKSRPARGNPQMVIPRGFFGLP
GQSNALRRRRSAKRTTSFPVRAASASEGVMRSRGSSHSPRPNHMSMRC
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgattaaggagtaccgtatcccgctccccctcaccgtcgacgagtaccgcgtc
gcccaactctacatgatcgctaaaaaatcacgtcaagaaagccatggggaaggcagcggt
gtggagatcctcgtgaatgaaccttacgaggatgggccgggacccgatggcaaggggcag
tacactcataagctttatcacgtcggaagccacttaccaggttggctgaagtctcttatt
cctaaatcggctttgtcggtggaggaggaagcgtggaatgcctacccttataccaagacc
cgcttcacttgcccctttgtagagaagttcagtattgaggtggaaacattctactatgat
gatgctggaaatcaagaaaatgtcttcaatctttcaaaatcagaaataaagcaaagagaa
atagatgtgattgatgtggtaaaggaccagttatatggggcagattatgttgaagaagaa
gatcctcgaaaatataagtcagagaaaactggaagaggcccattgggggataactggatt
acagagtactgggaaacatgcaagggccagcctactccgctatccacgggagaagccatc
atgtgtgcctacaagttgtgcaaggtggaatttcgctactggggcatgcagactaaaata
gaaaaatttattcatgatattgctttgagaaagacaatgctccgagctcatcgtcaagct
tgggcatggatggacgagtggtggggactcacaattgaagacatacgcaatattgaaaat
gaaactcagaagttgcttgctaagaaatatggaccaatgggtgatgatgagcaggaaggt
gaagatgatagtgctactccagaagctggagcagacattcctcagagcccaagtgtgtca
tcagatcgaactcctaatctagaaaaattgagcaaatacagctcatttaggactagtaat
gatttaggtgaacagtctcatgttatttgtgatgacgaagaaacagtagtaaagggtatt
gtaaataataataataacaataacaatgtagaaggtgaagaaaatggccggttgtcaggt
tcaagtccgaggcttcaaagacgagaattaaatgttagcatggatagtgttctcacagac
gaaaccagaaagagagggtcgtggtcaagaagtggttctagaaacacattaaattcccaa
aaccaagcaaactggagaatggagagtattagaagggattctgatacatcaggaagtgag
gaggaattctttgattgccaagggtcagccatccccattataaaggaggacttagaggag
aatgcagcattaaataaatggagctcgctggaactattgccccaagatggggattctcag
tcaacggctggtcacgctggtaatgaggatagcatcttctcacaagcattcatgtcaaga
gtagctgctgaacgtcataatcgagtgttgggtcgcagcatggaagcctcagccccatca
tccccatcccattccccgtcccaccagcctggcccatgttccacaacggttcttcttctg
gtaattcatgctggatccgtccttgacccaacatcagatgtaacaaacaagagaagtgat
gtgacaacatttcgaggagcgttggagtcagtgatgcgacaacactatccccagatggtg
ggccatgtggctattagactagtagctgcaccagcagtgtgctctgatgcacttaatata
ttatccagcctaagtccatatggcttagactcctcccccgtatgtggcgaagtatctgga
ggagatagtgtgcctgtgggtgctgtgcctctgttagcaaccactgttcaagagtatgat
gaagccgtcacccgaactattaatgctaccaatgcagcttaccatgagttcctaagatca
gaagaaggtcaaaattttaatggccaggtttgcattattggtgacagcattggtggtgtc
ttagcatatgatgttctctgccgtgcctacgaacagcataaatttggaagcaatagcaac
atccctgagggagaaccgccttccccgggtgaagaaattggtgaaaatgttcgggtgtat
cgcaaatcaatcagcagtgatggtgcatatcatacagagctgccccattgtcgttctgtc
tcagattctgattatcattatacgagacatctctcagctccatttcctcgccgtagatca
tcttcttcaagtgattacagccactgcaaattggaatttgaagtgacagatttcttcatg
tttggctgtcctcttgctctagtgctagtgtatcggaaaatgattattacctctgataaa
aactgtacaatacaacgcccagcatgtcagcaagtgtataatctctttcatccaactgat
cctctagcagttcgtgttgaacctttactgtctgcacggttttcactcctcacaccagtc
acaatcccacgctacaccaaatatcctctgggagatggcattccaactcatttgttggaa
tgtattcagtctaatggaggtgtgttcatggatattggtgggactacaggatctccgtca
ttggcaggacatactcgtcgtatgtcggatgcttctattctctccactgtttcagggatg
ggagatacggtcccaattgccacaataaatgccttgagtcagcggtggtggggaagtaaa
cggttagattatgcattatactgcccggaaggactagcaaatttcccaacaaactctctg
ccacatctgttccatgcttcttattgggagtcatcagatgtaatagcttttatattaaga
cagcttgtgagaaccgatcaagcagctcttgcagcagatgataaggaccttcctgtattc
tctccaatgcaaccaagagaaaaatggattaaaaaaagaacttctgttaaaattaagaat
gttgcagccaatcacagaggaaacgatgtacttgtacgtgaaggtgcgccacagtctttg
caagctcgctttatgtatggacctctggatatggtggggttgtcaggtgagaaggttgat
atacacatcatgcgtgaccctccaggtggtgactggcaacagataagcacagaagtaact
gacaagaatgggcgcattgcctttactattcctccagataaagctcttagttgtggcatg
tatcctgtcaagatggttgtgcggggtgaccacactagtgctactcattacctgactgtt
gtaccgcccaatactgaatgtgtggtgtttagtattgacggatctttcacggcatctgtt
tcggttactgggcgagatccaaaagtgcgagctggagctgtggatgttgttaggcactgg
caagagttgggatatttaataatttatgtaacaggccggcctgatatgcaacaacagaaa
gtcgtctcatggcttgcccaacataattttcctcatggccttgtctcctttgctgatgga
ctctcgagagacccattaggccataaggcagactatttacgtgtgctaatacaggatcat
gccgtggtaattatggcagcttatggcagtgcaaaggacattaatgtatatagtagcatt
ggccttaaacctgagcagatctatatagttggaaaagcaagcaaaaagcagcaagcactt
gcacaggttttgactgatggctatgcagcccacctttcctcattgtctgcgttaggaaaa
tctcggcctgcaagagggaacccgcagatggtgatacctcgtggattttttggactccca
ggtcaaagtaatgcattaagaagacgacgttctgccaagcggactacatcgttccccgtg
cgggcagcttcagcaagtgaaggggtgatgcggtcccgtggttcatcacactctccacgt
cccaaccacatgagcatgagatgttag
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