Procambarus clarkii (red swamp crayfish): 123745508
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Entry
123745508 CDS
T07930
Name
(RefSeq) putative transcription factor SPT20 homolog-like 2
KO
K21245
transcription factor SPT20 homolog
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123745508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcla03036
]
123745508
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
123745508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
123745508
NCBI-ProteinID:
XP_045582042
LinkDB
All DBs
Position
71:complement(9599242..9774904)
Genome browser
AA seq
1031 aa
AA seq
DB search
MDLMESLINKADYLIEQSHEALVQGSCGALHGHPLFSRLAAIYAEEATKTPRLKSISLTH
KLLEKLVKRDNLNCLVVNLYRGNEGYSLAIKMSSGLETETVRLSYEEDVFLTYIDNEKLP
PMLLDLLDESSIEIYQSGCVIAEVRDYRRTLDSSFDTRYLLLQPTNQSVAADIAAMTRDR
DWTSEERLHLEAEIIKRTAPPLNLSPSPMVAIINNKLHQRKYKFSTVPIKRAARRFSQIA
QNRQKSFEESAAPKCLRLHNFLSGKKDKRPSTKTLTKPLIPMSLDDGPELSVPDNIDVPK
VARTYERPNYTTDNSLVFIEELVLETERGQGRIYHTKLTISQRKTDEVYFGELYVDRDYQ
EGRQNGSTCKFQLGTQQQVCRYIQQFKEIFTEDWRKSVKITHRVAGQAAYSTFMQGSRDK
KDVELLRQSSAQQPGQQQTQQQTQQGQQQQSQQQQQSQQPIQQQAVAVAAAAVAAAAAGS
SGVASASSTTTMSQHTQPNVIIVSNGEGGVKKSVTVVTKPIAVTSASTLTSLISAQPVQQ
SSGGQHQVVVARSADITNLLAGRGGTTSAGMASMTGGIGGATKLAVAVTTGPGVSKISLP
SLTTQLNRSVPAYSQAVSLAKTQISSPSLTALLKGTVPASTQSVTIPRPQVVSLVGGVND
TSGHTKSSSNDSSSSSLNVSGLQQLLAGTPSADNPAPQRGGPSLLDRLSAQSSSAVAAAA
AANKQDGSVVKVGGSVSGACSQAGVGSSAAAAVLRSDSGTGGPPPNVNIASLNLPGLNVA
GLQSLTTNLSGLQNVQVTIPGLAVPISLSLNVPVSSSTGVILSSPPPASVATKVSGTTAG
TSAATVMIASQPTLQQGQVVQLPISQLNSPQLAAQLAKSSAQQGGSSSSIPVLQVQGVGG
QLFTSVRGGTSGGGGGGGTVGSSAGGGLSQQTVQVALQTTQGTGTVVSGAEAHTTTSQPS
VVALTAKQQLQLALQKTGPLSSFTQLQLQQKLAALAKRTQQQQQHQQQQQQQQQQQQQQQ
QQQQQQQQQQQ
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggatctcatggagtcactcatcaataaagctgattacctgatagagcagagtcatgaa
gcactggtccaaggcagctgtggagctcttcatggacatccactgttcagtagactggca
gcaatctatgccgaggaagctactaaaacacccagactcaagagtatcagcctaactcac
aaattattggagaagttggtaaaacgtgataacctcaactgcctggtggttaatttgtat
cgaggtaatgaaggatactctcttgctatcaaaatgtcatcgggactggaaacagaaact
gtccgactttcatatgaggaggatgtttttttgacatatattgataatgagaaacttcct
ccaatgcttctagacttgctagacgagtcaagcatagaaatctaccagtcaggatgtgta
atagctgaagttcgggattataggagaacacttgactcgtcttttgatacgcgatacctt
cttctccaacctacaaatcagtcagtagcagcagatattgcagctatgactcgggaccgt
gactggacctctgaagaacgccttcacttagaagcagaaataattaagcgaacagctcct
cctctcaatctttctccgtctcctatggtagcgatcatcaacaacaaactacatcaacga
aaatataaattttccaccgtgcctataaagagagcagcacggaggtttagtcagattgct
cagaatcgtcagaaaagttttgaagaatcagctgctccaaaatgtttaagactgcataac
ttcttgagtgggaagaaagacaaacgacctagtaccaaaaccttaacaaagccacttatt
ccaatgtcattggatgatggtccggagctgagtgttcctgataacatcgatgttcccaag
gttgctcgaacatatgagcgacctaattatacaaccgacaactccctggtgttcatcgaa
gagctagtactggaaacagaacgtggccaaggaaggatataccatactaagttgactatt
tctcaacgaaagaccgacgaagtgtactttggtgagctgtatgttgatcgtgattatcaa
gaaggcagacaaaatggatctacatgcaagtttcagttaggtacacagcagcaagtgtgc
cgctacattcaacagtttaaggagatattcaccgaggactggcggaagagtgtcaaaatt
acacatagggttgcagggcaagcagcatactctacttttatgcagggtagccgtgataag
aaagatgtagaattgctcaggcagtcgtccgctcaacaaccaggacaacaacaaactcag
cagcagacccagcaaggacaacaacaacaatcacagcagcaacagcagtctcagcagcct
atacagcagcaagcagtagcagtagcagcagctgcagttgcagctgctgcagctggatca
tctggggtagcatctgcttcatccaccacaactatgagccagcacactcaacctaatgtt
attattgtctcaaatggtgagggaggcgtgaagaagtctgtgactgttgtgaccaagcca
attgccgtgacctcggcctcgactcttaccagtctcatatcagctcagcctgtgcaacaa
agttcaggtggacaacaccaggtggtagttgcaagaagtgctgatatcaccaatttactg
gctggtagaggggggactacctcggcaggaatggccagcatgaccggaggcatcggtggt
gccaccaaactggcagtagctgttacaacaggtcctggggtttcaaagatttcccttcca
tctttaacaacacagctaaatcgctctgtaccagcatactcacaagctgtgtcattggcc
aaaactcagatctcatcgccatcactgacggcgctcctgaagggcacagtgccggcgagc
acacagtctgtcaccatacccaggccacaggttgtgagtcttgttggtggtgtcaatgat
acgtcgggtcataccaaatcttccagcaatgattcatcgtcttcatctcttaatgtttct
ggcctgcaacagctactagcaggtacaccatcagcagataatcctgctccacagagaggt
gggccgtcactactagatcgtctctctgcccagtcttcaagtgctgttgctgctgctgct
gctgcaaataagcaagatggcagtgtagtcaaagttggaggtagtgtgagtggtgcgtgc
agccaggctggggttggcagttctgcagcagcagcagtgttgcggagtgacagcggcact
ggtggaccacctcctaatgtcaatattgcaagtcttaatctacctggcttaaatgtagca
ggcttgcagagtctgacaaccaacctcagtggtcttcagaatgttcaggtgaccatccct
ggcttggccgtgcccatatcactctcacttaatgtgcctgtcagcagctccactggtgtc
atcctctcatcaccaccacctgcaagtgttgcaacgaaggtgtcgggcacgacggcaggc
acgtctgcagcaacggtaatgatagccagtcagccaactttgcagcagggtcaagttgtt
caactgccaataagtcagctgaattctccccaactggcagctcagttagccaagtcatct
gctcagcaaggtggctcatcatcgtcaatcccagttctgcaggtgcaaggtgttggaggg
cagctgtttacatcagtgcgtggcgggacgagtggaggtggcggtggtgggggaacagtt
ggttcctctgctggtggggggctgtcacagcagacagtacaagtagcactgcagacaaca
cagggtactggcactgttgtgtcgggagctgaagcacacaccactacttcccagccatca
gttgtggctctaacagctaaacaacagctccagttggctctacaaaagacagggccattg
agtagttttacacagttacaacttcaacaaaaactagctgctcttgccaaacgcacacaa
cagcagcagcagcatcagcaacaacagcaacaacaacagcagcaacaacaacagcagcaa
cagcagcaacaacaacagcagcagcagcagcagtag
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