Procambarus clarkii (red swamp crayfish): 123745556
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Entry
123745556 CDS
T07930
Name
(RefSeq) transient-receptor-potential-like protein isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcla04040
]
123745556
Ion channels [BR:
pcla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123745556
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
YVC1_C
PKD_channel
CCDC90-like
Motif
Other DBs
NCBI-GeneID:
123745556
NCBI-ProteinID:
XP_069168154
LinkDB
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Position
71:14653469..14782544
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AA seq
1274 aa
AA seq
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MPAIRGVEADVEEIKLRDSFSSNSSKANSIARALKKKISLTRLTSRTSLVVDKDKEERER
ERRPSRGRYPTFTIEDWEEGEHNGAFREDPAFKDDSRADEKSEFEVDTDVGDDGEAEGVS
LVDNEDIRSVSSSKRTSQLSVDHSMVKCGRAKFFKRLSVCDLKDGHMMDPKERVFLEAAE
RGDKHTMMRCLSPPSAVNVNCTDILGRSAIQIAVDNENVEIVELLLLQENVKIGDALLYA
ITEGVYKIVEMLINHPSITPEMLANDWVKVRAGGEESSDFDPNISPIILAAHCNQFEILQ
LFLSRGAYIDKPHPLSCCCRPCTEGFHADSLRYSMRRIHTYRALASPAWISLTSEDPILA
AFRLSWELERLARVENEFKDTYLELSDQCKKYTCELLHQCRSTQEVIAVLNRRSEEDSED
DDDEDDPQQLKLSRLKLALKYDQKQFVAHPNCQQLLTSVWHEGLPIWRRRNALVKILLCL
SIILCMPIIAIIYLIFPRTSLGRVIRSPFMKFIYHSASFGLFLVLLVLASTRTEGSERHR
RNLRGPAPTFVEWLIFFWVTGMVWAECKQLWEEGLTAYIRQWWNWLDFIMLSLYLCTFSL
RAVAFVQITTNKYGPREVPRAQWPANDPTLIAEGVFAVANVFSFARIIYLFQTNPHLGPL
QISLGCMIIDIAKFLFIFFLVLTSFACGLNQLYWYYDPPSTSCSTVGGDTTCHSGSDAFN
TDGGEYKGGFKTLDVTFATLFWSLFGISSPKSTDLEEEHGFIETVGQGLFMAYHVMSIIV
LINMLIAMMSNSFQQIEDHADQEWKFARSKLWMSYFDPGSTLPAPFNLIISPKAIFYFMR
TVKNCLQYICYRRNRRRSDKRRSFTMEKGTLQGGAPPGRMSQSNRYAEVMRRLVSRYIHQ
TKKQHRQDGVNEDDLLEIKQDISSLRYELREDRKRETARAYGQMDSIKKDILRLLKQSGR
TAARSGNGRETEGAVGGASANPVALTTSVAPCPACIHSPGVGVTSPCHPSLGTPGIVQQH
SVDLGMLGREPTSAAVDITVTPASSLPCNLTYSQASMGLPSPQSLLPVGNLTGCLLAPQE
MDYLRKEIVSSLRSELREMLRDALSRALTPTTNMAPQYYSPTPTPNPSPQYATTPTANTA
QMAAPQFPSPVAPQQKQCSQCPPAPASSYSPPSPTSQPPQHPHLRVSTSLSDPFSQRSSS
GPQSSSGSSPIPQSSPRSSPIPPPCQRSNSSSGLTQRSQGISQSGGSSKSPTNQVLLRPP
NESDRVHTHMYTQL
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgccggctataagaggagtcgaggccgacgtggaggagattaaactcagagacagcttc
tcgagtaactcctccaaggccaactccatagccagggccttgaagaagaagatatccctt
acgaggttgacctccagaacgtccctggttgtggataaggataaggaggagagggagcga
gagaggcggccgtcgaggggcagatacccaacctttaccatcgaggattgggaagagggc
gagcataatggcgccttcagggaggacccggccttcaaggacgactcgagggccgacgag
aagagcgagttcgaggtggataccgacgtgggggacgatggcgaggccgagggcgtgtcg
ttggtggataacgaggatatccggtctgtgagttcgagcaagaggacgagccagttgagt
gtggatcactcgatggtcaagtgtgggcgggccaagttcttcaagcgcctctccgtctgt
gacctcaaggatggtcacatgatggatccgaaggagcgggtgttcctggaggcggcggag
cgcggggacaagcacactatgatgcgctgcctctcccctccttcagccgtcaacgttaac
tgcacggacatcctgggacgctcggccatccagatcgccgtcgacaacgagaacgtagag
atcgtcgaactcctcctcctgcaagagaacgtcaaaatcggcgacgccttgctgtacgcc
atcacagagggcgtctacaagatcgtggagatgcttatcaatcatcccagcatcactcca
gagatgctggccaacgactgggttaaggtccgtgctgggggagaggagtcgagtgacttc
gaccccaacatctcgcccatcattcttgccgcccactgcaaccagttcgagattcttcag
ctctttctctcccgaggtgcatacattgacaagccacacccgctgtcatgttgctgccga
ccatgtacagaggggttccatgcagactcgctgcggtactctatgcgtcgtatccacacc
taccgtgctctggcctccccagcctggatctctctcacctccgaagatccgatactcgct
gctttcaggctgtcatgggagctagaacgactagcacgggtggagaacgaatttaaggac
acttacctggagctgagtgaccagtgcaagaagtacacctgtgagctgctacaccagtgt
cgctctacacaggaggtgattgcggtcctcaaccgccgcagtgaagaagactctgaggat
gatgacgatgaggatgatcctcaacagctgaagttatcaaggcttaagctggcccttaag
tatgatcaaaagcagtttgtggctcacccaaactgccagcagctgttgacgtcagtgtgg
catgaaggtcttcccatctggcgccggaggaatgccttggtcaagatcttgctctgcctc
tccatcatcctctgcatgcctatcattgccatcatttatctcatctttcccagaacaagc
cttggcagagtaatacgctctcccttcatgaagttcatctatcacagtgcttccttcggg
ctcttcctagtgctgttggtgctggcctccaccagaacagagggcagcgagagacaccgc
aggaatctccgtggacctgcaccaacctttgtcgagtggctcatttttttctgggttact
ggcatggtgtgggcagagtgcaaacagctatgggaagaggggctgactgcttacatccgc
cagtggtggaactggctcgacttcataatgctctccctctacctgtgtaccttcagtctg
cgggccgttgccttcgttcagattaccaccaacaagtatggtcccagagaggttccacgt
gcccagtggccagccaatgatccaacgctcattgccgaaggagtgtttgctgtggccaat
gtcttctcctttgccagaatcatctacttgtttcagactaaccctcatcttggccccctt
caaatttcccttggctgcatgatcatagatattgccaagtttttgttcatcttcttcctg
gtgctgacgagcttcgcatgtggccttaaccagctctattggtactatgatcctcctagt
acctcttgcagcactgttggtggggacactacgtgccactctggctcagacgccttcaac
actgatggtggcgagtacaaaggcggcttcaagacgttggacgtgacatttgcaacgctg
ttttggtccctgtttggtatcagttctcccaagagtacggaccttgaggaggagcatggg
ttcatagagactgtggggcagggcctcttcatggcctaccacgtcatgtccatcattgtt
cttattaatatgctcatagctatgatgtccaacagtttccaacagatagaggaccatgct
gatcaggaatggaagtttgctcgctctaaactgtggatgagttacttcgacccaggttcc
accctgcccgcacctttcaacctcatcattagccccaaggccattttctactttatgaga
accgtcaagaactgtctccagtacatttgttaccggagaaatcgcagacgctctgacaag
agaaggagcttcactatggagaaaggcaccttacagggaggggcgcctcctggtcggatg
agccagtcaaacaggtatgcggaggtgatgcgtcgtctggtctcgcgctatatacaccag
accaagaagcaacatcgccaagatggagtgaatgaggatgatcttctagagatcaagcag
gacatctccagtctcaggtatgagttgcgagaggacagaaaacgagaaacggcaagggca
tacggtcagatggattccatcaaaaaggatatcctgagactcttgaagcagagtgggcgt
acggccgcccgatcaggaaatggccgagagactgaaggggctgtgggaggggcatcagcc
aaccctgtggctctaaccaccagtgttgcgccctgtcctgcctgcatccactctccaggt
gtaggtgtgactagtccctgccacccaagtttggggacccctggtattgtccagcagcac
tcggtggacctgggaatgctaggccgcgagcccacctcggctgctgtcgacattaccgtc
actccagcctcctctctaccttgtaacctcacgtattcacaagcatcgatgggtcttcct
tcacctcaaagtcttcttcccgtgggtaacttgacaggatgcctgctggcaccacaggaa
atggactatttgcgaaaggagattgtcagcagcctacggagtgaacttcgagaaatgctg
cgagatgctctgtcacgtgccctcacgcccaccaccaacatggccccgcagtactattca
ccaacaccaactccaaatcccagcccgcagtatgctaccactcccactgccaatactgct
cagatggccgcaccacaattcccttctccagtggcaccacaacagaaacagtgcagtcag
tgccccccagcaccagcatcttcgtattccccaccttctcccacatcccaacctccccaa
catcctcaccttagagtttcaacttctttaagtgacccattttctcagaggtctagttct
ggtccacaatcctcctcagggtcaagtcctattcctcagtcctctccaagatcaagtcca
attcccccaccatgtcaaaggtcaaactccagttctgggttaactcaaaggtcacaagga
atctcccagtctggtggctcatcgaagtcacctaccaaccaagttcttctacgcccaccc
aatgagtccgaccgcgtacacacacacatgtacacacagctgtga
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