Procambarus clarkii (red swamp crayfish): 123745581
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Entry
123745581 CDS
T07930
Symbol
Caf1-55
Name
(RefSeq) chromatin assembly factor 1 p55 subunit isoform X2
KO
K10752
histone-binding protein RBBP4
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03082
ATP-dependent chromatin remodeling
pcla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123745581 (Caf1-55)
03083 Polycomb repressive complex
123745581 (Caf1-55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcla03036
]
123745581 (Caf1-55)
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
123745581 (Caf1-55)
Histone modification proteins
HAT complexes
HATB complex
123745581 (Caf1-55)
HDAC complexes
Sin3A-HDAC complex
123745581 (Caf1-55)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
123745581 (Caf1-55)
PRC2.2
123745581 (Caf1-55)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
123745581 (Caf1-55)
Heterochromatin formation proteins
Other heterochromatin formation proteins
123745581 (Caf1-55)
Chromatin remodeling factors
NuRD complex
123745581 (Caf1-55)
NuRF complex
123745581 (Caf1-55)
NuRF complex (fruit fly)
123745581 (Caf1-55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
CAF1C_H4-bd
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
DSE1_N
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
ASA1
eIF2A
PAC11
Beta-prop_NOL10_N
Beta-prop_RIG_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR41
MIOS_WD40
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
123745581
NCBI-ProteinID:
XP_045582210
LinkDB
All DBs
Position
71:complement(15772200..15797156)
Genome browser
AA seq
468 aa
AA seq
DB search
MTDKEGAKGKHTTTKRTIGDGGGPVRAAPDLPTTVAVAEVTPVQRLQDTFDDAVEERVIN
EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSDEQNH
LLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPC
VIATKTPSSDVLVFDYTKHPSKPDPSGECHPDLRLRGHQKEGYGLSWNPNLNGYLLSASD
DHTICLWDINATPKENRVIDAKTIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTR
ANNTNKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKD
EVFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKIS
DFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPETPASELESGAS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaggagggcgcgaagggtaagcataccacaaccaagcgaaccataggggat
ggcggtggccctgtgcgtgcggcaccagacctcccgacaaccgtggctgtggcagaggta
acacctgtgcaacgtctgcaagacaccttcgacgatgcagtggaggagcgggtcattaac
gaggagtacaagatatggaagaagaacactccttttttgtacgaccttgtcatgactcat
gccttggagtggccgtcgcttacagcacagtggctccctgatgttacaaggccagaagga
aaggactacagcattcatcggctgatccttggaacgcacactagcgacgaacagaaccac
ctactcattgcctcggttcagcttccaaatgaagatgctcaatttgatgcatcacattat
gataatgaaaaaggagaatttggaggttttggctctgtcagtggaaagattgaaatagag
ataaaaattaaccacgaaggagaagtaaatagagctcgatatatgcctcaaaatccgtgt
gtgattgctacgaagaccccatccagcgacgtccttgtctttgactatactaagcaccct
tcaaaacccgatccatcaggagagtgtcatccagatcttaggctacgtggtcaccagaaa
gaaggttatggattgtcatggaatcccaacttgaatggctacctccttagtgcatctgat
gaccacactatttgcttgtgggatattaatgccacaccaaaagagaacagagttatcgat
gcaaagaccattttcacaggccacacagcagttgttgaggatgttgcgtggcatctcctt
catgaatcgctgtttggttcggtggcggacgaccagaagctaatgatctgggatactcgc
gccaacaacacaaataaaccttctcacaccgttgatgctcacaccgctgaagtcaattgt
ctctcctttaatccctattcagaatttattctagctactggcagtgctgacaagacagtt
gccttgtgggacctgcgcaatctcaagctgaaactccactcatttgagtcgcacaaagat
gaggttttccaggttcagtggtcacctcataacgagacaatcctggcaagttcgggcacc
gaccgtcgcctgcacgtgtgggacctcagcaagattggtgaagagcagagtgctgaggac
gctgaagatggtcccccggaacttctgttcattcacggaggccatactgctaagatctcc
gatttctcctggaaccctaatgagccttgggtgatctgctcggtcagtgaagataacatc
atgcaggtttggcagatggcagaaaatatctacaatgatgaggaaccagagaccccagct
tcagaacttgaatcaggtgcatcttaa
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integrated database retrieval system
