Procambarus clarkii (red swamp crayfish): 123745666
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Entry
123745666 CDS
T07930
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
123745666
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Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
PDZ_6
FHA
PDZ_2
RA_2
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
123745666
NCBI-ProteinID:
XP_069168143
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Position
71:13607117..13963750
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AA seq
2018 aa
AA seq
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MGDDAGARRVQERENLRHIIQQWNANRLDLFEISEPNEELEFHGVMRFYFQDSGQKVATK
CIRVPSTANSRYVIETLVEKFRPDMRMLSIPEYALYEIHENGDERRLADDEKPLLVQLNW
NKDDREGRFLLRRMDLYNFGLSYEGGSTLVNTLPPHPTTPIPTKEQPFQRKLSKREKKEL
KKQEKLRRANEANEADSSVAEKLYTELPETSFTRSISNPEAVMRRRRAQKLEKKLQQFRS
KDGGPDTGGTLKIYGESLRPDVPYKTLLLSIRDNALSVVGEMLDKYGLYKEDPNNYCLVQ
TVIGIEDGYGGPTSPLKEYILDDDECPLAILMNHPPSRGSIMFHVRRRPADHGPRKRKKK
PVKGAGSGPGGDALDHHRSRDPYFLPDRLPFLVELGPDGTELGGTGRQHQLHLNVTEVGT
DRSTHTGGQSLQLFGSNIQPRHCVIAHTEGIVTVTPCSRDADTFVNGQRIYETTILQHGC
FVRFGRIHNFRFIDPQQDDRMRQHHLIDRSGQEKTATGGPGEKQEAGGDTVSHAGSHSGS
QAGSRNSKSSAQERPNRIDQSFEGRGNYERYPPARDPILPAVLEFREESEEAFLHAITTD
LDPTDVQFKLAPTYTLYMAARFRASTHYRPDLSPTDRAHRLTEMLTKVAAMVQNVIHSRH
GDPTSLAFWMANASELLHFLKQDRHVCGYSLDAQDILAEAVQVAFRSLVDCMQAELSTSL
PMFLEDRDDVNEEEGSTAHVLSILTNTMALLRRCRVNAALTIQLFSQLFHFINMWVFNRI
VVDSHPNFCTRVWGIRLKRRLARIELWAEKQGLELAADCHLARLSQAAMLLHSQKSAPDD
IATISSTCFKLNSLQLRALLEKYQPMQDEPKIPQDLIDNVVAVAESTADGLAREDGREVR
LEEEIDLQLPFLLPEDGYSCDIVRGVPSGLAEFLNPLQHAGLCSMNPQPSSSGYWTIYMH
DQDMRPPPGPRSPSVMSNRSMSIPRGEPEIHIIQLHKSNNGMGLSIVATKGVNQDKLGIY
IKSVVPGGAADQDGRLQAGDQLLSVDGKSLIGITQERAAEYMMETGPVVTLEVARQGAIY
HGLATILSQPSPHVNRASLRKMRPRAEEAPRAAMTNSQSTPNMGGFNERLVDWNQPPRQH
PLPPTSSHSSLMARSSPNLAAPIEGYPGGRHLSERDLPSKVLGEHNQDSPAPSHLHQAPR
MQASKSVPSLNSEAGSSVGGKPASLEVFNPSYSRTSSNTSLSQPPNPQFSHHPHHQHHHQ
QQQQQQQQQQQQQQQQQQQPPVRSRSTQNLSDGSYPGLVGRHPSNPSLMAEEERYYQNVN
FHQGTQDSRMGSIRTRPVQALPMGSPASQESSEHVRPDARPDPRPASAFMQREDLIPHRS
ELQRPASQRDLRADAKMSEMAEEVRRREERARLNGHTSSTLPQRSSQNQPPHRVPNTFPA
TSTPFLPDNYSGSQGFPNQHPAYHHTTSQPLSPQGTMAGLQQTPQQAHPQYSGHGQTLLG
KLPPPTAPKPKSQGGLPGSSLSEAPEKPSRQFGYDGTNSIDGPPRPPPPEEGYRESPPPP
PPPTSTHPLLQTSNRPASGVSQLPNKSAFNKTSPWDREQKELHDRHRREAARHWRDEQIS
KLENLSVRTSQQDERLRTLRLEKEFQRRAEEALTNDDDDDDDEDDDDDDDVDVSNDNEVI
LRRGPENSVIRDYNKPTNTASITTPGQESRMNGGGPADEERARKVDEIRRKQQELEAAKE
VEERLLREAQRRQQEEHMRRFQQQHHEQQQQQQQQQQLLLQQQQQLQQGIAPQHPQYQHQ
HHATQRLDSLVATPFHTQYSNGPVNGVRGSHNSYPDQPGMSENNQRSDTVTAASQHSPIP
PERGSSYSIMQQTTTPAQPATNNRYKGQDASSTIKRVQFSETTTVDAHITYDNNANQEKT
PRQDPNNFINEAETFLTSSPTLNVGGITPGVIGAQEVYRDPRMRRLQQKQAEQAAAKNPG
PEKLTFKEKMKMFAMETGEAETPKDKVKISRAQRDIEH
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgacgcaggagcaaggcgtgtccaggagagggagaacttgcgtcatattata
caacagtggaacgccaacagactcgacttgttcgaaatctctgaaccaaacgaggagctg
gagttccacggggtgatgcggttctacttccaagactccgggcagaaggtggccacgaag
tgcatccgggtccccagcaccgctaactcccgctacgtcattgagacgctggtcgagaag
ttccggccggatatgcgcatgctctccatccccgagtacgcgctctacgagatacacgaa
aacggagatgaacgtcgactggcggatgatgagaagccgctgttggtgcagttaaactgg
aacaaagatgaccgggagggcaggtttctccttcggcggatggacctctacaactttggc
ttgtcttatgagggtggttctacattagtcaacactctaccccctcaccctaccacaccc
ataccaaccaaagagcagccattccagcgtaaattatccaaacgtgagaaaaaagaactt
aagaagcaagagaaactgcgtagagcaaacgaagcaaatgaagccgactcgtcagtggca
gaaaaattatatacagagttaccagaaacaagtttcacacgtagcatcagtaatcctgag
gctgtgatgagacgaagaagagctcagaaactggagaaaaaactgcaacagttccgaagt
aaagatggtgggcctgatacaggtggcactctgaagatttatggtgaatctctccgtcct
gatgtgccttataagacgctactcctgtctatccgagataacgctctcagtgtggtggga
gaaatgttagataaatatggcctttataaagaagatcccaataattattgtctggtgcag
actgtcataggcattgaagatggctatggaggacctacatccccacttaaagaatatatc
cttgatgatgacgagtgtccactggctattcttatgaatcatccaccttccagagggtcg
atcatgttccatgtccggcggcggcctgcggaccacggcccccgcaagcggaagaagaag
ccggtgaagggcgcaggcagcgggccagggggcgatgcccttgatcaccaccgctccaga
gacccctacttcctgcctgacaggctgcccttccttgttgagctaggtcctgatggcact
gaactaggtgggacaggtagacagcatcagctacacctcaatgtaacggaagttggcaca
gaccgaagcactcacaccggaggacagtctcttcagctttttggctctaacatccagcct
cgccactgtgtcatcgcacatacagaaggcatcgtcactgtcacaccatgttcccgggat
gcagataccttcgttaatggacaacgcatatatgagaccacaattcttcagcatggctgc
tttgtacgatttggacgtatccacaatttccgattcattgatccacaacaggatgatcga
atgcgtcaacaccacctaatagacagatctgggcaagagaagactgcaacagggggacct
ggggagaagcaagaggctgggggggacaccgtgtcgcatgctgggtcacactcgggctct
caggctgggtcacgcaactctaagtcatccgcgcaagaacgtcccaacaggattgatcaa
agctttgagggcaggggcaactatgaacgatatcctccagcccgagatccaatacttcct
gccgtgctggaatttcgagaggaaagtgaagaggcatttcttcatgccattacgactgac
cttgacccaaccgatgtacagtttaaacttgcaccaacgtatacgctctacatggctgcc
aggtttagagcatcaacccactaccgtccagacctgagcccaacagaccgtgctcacagg
ttaacagaaatgctcaccaaggttgcagcaatggttcaaaatgtcatacattctcgtcat
ggagatcccacatctttagccttctggatggcaaatgcttcagaattactccactttttg
aagcaagaccgacacgtttgtggctattctcttgatgctcaggatattctagcggaggct
gttcaggttgcctttagaagtttggtggactgcatgcaagcagagttgtctacatcatta
ccaatgtttttggaagatagagatgatgtaaatgaagaggaagggtccaccgctcacgtg
ctgtccatcttaaccaacaccatggctttgttgcgacggtgtcgggtgaatgctgctcta
actattcagctgttctctcagctttttcatttcatcaacatgtgggtgttcaaccgaatt
gtagtcgactctcaccccaatttttgcaccagagtgtggggtataagactaaaacgacgt
ttagctcgtattgagctgtgggcagagaagcaggggctagagctggctgccgattgtcac
ttggcgagactctcacaagcagccatgttgctacattcccaaaagtctgctccagatgat
atagcaaccatatcatccacatgtttcaaacttaattcacttcagctccgagctctatta
gaaaaatatcagccgatgcaagatgagccgaaaatacctcaagacctgattgacaatgtt
gtagctgttgcagaaagcacagctgatggcctggctcgagaagatggtagagaagtgcgg
ttagaagaggagattgatttacagcttccgttccttctgccagaggatgggtattcttgt
gatatagtacgtggcgttccctcgggtctggctgaatttttgaaccctctccaacatgct
gggctgtgcagtatgaatccacagccatcatcctctggttattggaccatatatatgcat
gaccaggatatgaggcctcctccagggcctcgaagtcctagtgtgatgagtaatcgatcg
atgtctattccgcgtggtgagccagaaatccacattatccaactacacaaatccaacaat
gggatggggctttctattgttgcaactaagggtgttaaccaggacaagttggggatctac
atcaagagcgtcgttccaggaggagctgcagaccaggatgggagactgcaggcaggggat
cagcttttatcagtggatggaaaatctctgattggcatcacccaagagcgtgcagccgag
tacatgatggaaactggccctgtagtgaccttggaagtggctcgacagggagccatttac
catggattggctaccatcctatcacagccatcgcctcatgttaaccgagcatccctgcgg
aagatgcgtcctcgggcagaggaggcccctcgtgcagctatgactaacagccagtccacg
cctaacatgggcgggttcaacgagcggctggtggattggaatcagcctcctcgccagcat
cccctccccccaacctcctcccacagctctctgatggccaggtctagccccaatctggct
gctccaattgaaggttatcctggtggtcggcatttgagcgagcgtgatcttccatccaaa
gtacttggggaacacaatcaggactctcctgcaccctctcaccttcaccaagctcctcgt
atgcaagcatccaagtctgttccctcgctgaatagtgaagctggcagtagtgtaggaggg
aagccagcttctctcgaggtcttcaacccttcttactcccgcacctcctctaatacctca
ctgtcacagcctccaaatcctcagttttctcaccatcctcatcaccaacaccaccatcag
cagcaacaacagcagcagcagcagcagcagcagcaacaacaacagcagcaacagcaacct
ccagtccgttccaggtcgacccaaaatctgagtgatggaagttatccaggccttgttggt
cgtcatccaagtaatcccagcctcatggcggaagaggaacgctactatcaaaatgtaaac
tttcatcaaggcacccaagactctcgcatgggctcaatacgaactcgtccagttcaggca
ctcccaatgggttctccagcatcgcaagaatcttcagaacatgtgcgacctgatgctcga
cccgatccccgcccggcttcggcgtttatgcagcgagaggatttaatacctcacagatca
gaattacagcgtccagcctctcaacgtgatcttcgtgccgatgcaaagatgtcagaaatg
gcagaagaagtgcgacggcgagaggagcgtgcacgccttaatggtcacacatcatctact
ctaccacagcgatccagccagaaccaaccacctcaccgtgtgccaaatacctttccagct
acaagtactcccttcttacctgataattacagtggctcacagggcttcccaaatcaacac
cctgcttatcaccataccacttcacaaccacttagtccgcaggggacaatggcagggctc
caacaaacacctcagcaggcccatccacaatatagtggacatgggcaaactttgctgggt
aagcttcctcctccaacagcccccaagccaaaatcacagggtggcttgccgggttcttcc
ctgtctgaggcaccagagaaaccctcacgacagtttggttatgatggaactaattccatt
gatggacctccaagaccacccccaccagaggaggggtatcgggaatctccaccaccacct
ccgccccctacctctactcatccacttctccagaccagcaaccggccagcttctggtgta
agccagttacctaacaaatcggccttcaataaaaccagcccatgggatagagaacagaag
gaactgcacgatcgtcatcggcgtgaggctgctcgacattggcgtgatgagcagatttca
aaacttgaaaatctttctgtgcgtacatctcagcaggatgaaagactacgaactcttcgc
ttggaaaaagagtttcagcgtcgtgcagaggaggctcttacaaatgatgatgatgacgat
gatgatgaagatgacgacgatgatgatgatgtggatgtttcaaatgacaatgaagttatc
ctgagacgaggtccagagaatagtgtaatcagagactataataaacctacaaatacagcc
tcaatcaccactcctggtcaagagtctcggatgaatggtggtggccctgctgatgaggag
cgtgcaaggaaagttgatgagatccgaaggaagcaacaagagttagaggctgcaaaggaa
gttgaagaacgtctcttgcgggaggcacagcgtcggcaacaggaggaacacatgcgccgt
ttccagcagcaacaccacgagcagcagcagcagcagcagcagcagcagcaactactactt
caacagcaacaacaacttcaacaaggcattgctcctcaacatcctcagtaccagcatcag
caccatgcaacccagagacttgactctcttgttgctacccctttccatacacaatacagc
aatggtccagtaaatggggtaagaggatctcataatagttacccagaccaacctgggatg
agtgagaataatcagcgttcagacactgtaacggctgcttcccagcacagcccgattcct
ccagaaagaggctcttcgtactctataatgcaacaaacgactactccagcacagccagca
acaaataatcgttacaagggtcaagatgcatcatctactataaagcgtgtgcaattctca
gagaccacaactgttgatgcacacattacttatgacaataatgccaaccaagagaaaaca
ccacgacaggaccctaataacttcattaatgaggcagaaacctttttaacctcatcacca
acacttaacgttggaggcatcactccaggtgtgatcggggctcaagaggtgtacagggat
cctcgcatgcgacgattacaacaaaaacaagctgaacaagcagctgcaaagaatcctgga
ccagagaaacttactttcaaggagaaaatgaaaatgtttgcaatggaaactggggaggca
gaaactcctaaagacaaagttaaaattagcagagctcaaagagacatagagcattga
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