Procambarus clarkii (red swamp crayfish): 123745843
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Entry
123745843 CDS
T07930
Name
(RefSeq) LOW QUALITY PROTEIN: helicase domino
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123745843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcla03036
]
123745843
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
123745843
SWR1 complex
123745843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
123745843
NCBI-ProteinID:
XP_045582865
LinkDB
All DBs
Position
88:complement(16479207..16575400)
Genome browser
AA seq
2899 aa
AA seq
DB search
MSARETSVHNETTTSSHNVTDITQAVAGGIAPSSSSNNSSGGGGGGAECQLVQQLVSPVK
AGSMGCGEGELVRLTDPRTLHSYTPRTSPVPSTYTTPVLTEVTPTSTPSSSPRRPPPSIS
LQPPAKRIKVEEKPFDLLELRKVITDWKKAKLEGVKEKYNDHLVELFFLERDGNMMDYQS
WSRRPTREFLQFIRHHKLEGDESLEAKFTVPNPLHLTSGVQIKTENPSGPQSPLKGVLGA
NVRTSSSPVKPGKGLASPAMGARQKMPSTSENIQVTQQDQMVEKARQEAYVMQRIASLRK
EGLWAEKRLPKVQEPPRAKAHWDYLLEEMVWLSADFAQERKWKKAAAKKCARMVQKYFQD
KALQAQKAEKEQEMRTRKIAAYIAKEIRTFWGNVEKLVEYKVTTKLDEKKKKALDQQLSF
IVDQTEKYSSWLAESMNKPADSAAASTRSNTPSRDSRMSDEEFRPEESSDDDEGTIARED
DNPEEQASELQLLHEESKQTLEDLLKDLPPGYLEGGDISLDNSTENLDSLGECPDSVEEK
DEEKVKEEVIGHEVTIEKDEKDVDSVSDKKNVRNIKRRKVKLRTGDNISEIDKDEDQDFK
VEESDEDNEDTIEEQEKKEEETDHQQEINELQAENELSVEELRKKYAELAANAEPMEEEE
SEDDSSEDEEEDDVNDDEEMVVEELEDEGKQESEKEDECSDGDEEMPSDEEEEEDLSLGL
ETLMKENLEKDSKVDSEKADKELQDASAVAEALQPKGFTLSSTSVTTPIPVLLKHTLREY
QHVGLDWLTTMFEKKLNGILADEMGLGKTIQTISLLAHLACEKSNWGPHLIVVPTSVMLN
WEMEFKKWCPAFKILTYYGTQKERKMKRQGWTKPNAFHICITSYKLVIQDHQSFRRKKWK
YFILDEAQNIKNFKSQRWQLLLNFQSQRRLLLTGTPLQNNLMELWSLMHFLMPNVFASHR
EFREWFSNPMTGMIEGNKEYNDTIIKRLHKVLRPFILRRLKSEVEQQMPKKFEHVVMCRL
SKRQRFLYEEFMSRAKTRETLAAGNFLSVINVLMQLRKVCNHPNLFEPRPTVSPFMMEGL
SYNVPSIIWGLIDYDPFREVDLFCLNFLLADLELCLTAFAAHRIRKFQAPRRLIEEIDSA
PDPPPKCPAGKIKLHVRPSSQSVPKTGVSPASTPRVPTPVGALRAPVPQTPTLASTSTTT
TTTTNLQGGGMRFQLVQQGGTIKAIQVPVTGASGGMVVQQTPQGPRLVIPQRTTLGVPGA
TASIGGAPTTGASAMGGLQLLQTASGQLLLTTAPVQKPANPTLSQGVSGTAAAALLQRLQ
GLKGLQGSMITTGAGGRPVLRLPLPTSNFRPQTQILATGNNQTTAAIRVSSPAAPLQTTP
VASPVRTGPSSPAARAPPPSTTPTKPITRIDQRELERQDEKKKEEERKRTLFCLNDLEER
RRKRRKDKLSLISRLNTRRCQACPIYGSDLIEAVSVINPGHGTTYSYGKWNGKGMVHCLH
ATELKSRQYWFETESLHNLVQTPETYLKLLKDTTDRYVFCIPSVVAPLICMRMSHPPPSK
LWAQERMKALLKTHASPAIAPLHHIMNAAVTQFPDPRLIQYDCGKLQTLDRLLRQLKTGG
HRILIFTQMTKMLDVFEAFLNYHGHLYLRLDGTTRVDQRQVLMERFNQDKRIFAFILSTR
SGGIGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISEKTIEENILKK
ANQKRLLGDLAIEGGNFTTAHFKKSTIQDLFEVNVNENDASKRMSEVIEKSKPPDEGKEV
TEGEKVKMGAFESALAAAEDETDVQAAKTAKAEMAAELAEFDENIPIEEGEGSEELSKAE
QEVANLMKQLSPVERYAMKFLESSDDGWAAEAERMAAEIEQQKKEWELGRLQALKEEEER
LAHNSDEDLLTYTSADAHNQLWLSLCGREEMPIWHPPTPPRDDNDVYIDHALGFWYDSST
MPESALPPVYIKKEHKRLKLEPGASGDGSCGLRRPQKLRREDAVCAPRSLFDRPSPAVVK
IRRDLKLQKYRGIVRPSIPLPGLKPAILTKPPAAEPENTPEWTVHEDWAVVQAVQQHLQL
ELPVNLLVLSPGHTPNWDLVADLVNSISRCYRSPRHCRTRYESTILPREEGKLPPEVTTK
KISKKQKSGVLSKPIHKSSRPMRTSQLFAQDNNSSFSSLYCTRFETIKNIAIKRTPTTKP
PLVNPTHKNPKHAQVLAESGIQYDGPLNPGQVAANLAERIQRAKQKSQAELAQQQQQKLL
QQQQLQLQQQQQQQQQQIQQAQLTANQLQQQLQQQQQPQQNQVQQQTVQQQAQQQQGQQQ
VSVVGNTTAQQVVSSGLSGKVATSVVLSQGAAMTVATVTAATATTTAASSSTTAAILGGV
RTAAGVANAGRTTLALQELQVRTSGSNQGTVVSVAGLAQLQAAKLTATLSSQSSTQKGVT
TVPRSLTPAQLQYLKTQAQARQALALQQQQGKVVATGDQTIKRVQIAGQAGTTQKVQVAV
SGGTLAAVTAIQVSQAGRTQLVKPGTVMAGASGVMTAGKAVTRTVTDREVAALLKQQQLN
KSGQVAQVQVPSAQLLAGLQVQGSVSGGTPVATLVKTVSAPSTMVHTPTTVTLPVSAINV
TLPQARVTTAATVAKAATTQQTVRNIPLPQQLLAKQRSLMGVKGAVGLQLGSKGVGGTGL
NTVQIVQGGGQKQMSHVTVQQIQQVFKQVPQQTIQHITQGGTVSGTVVGKAVGNTVAGTS
VTTSGSQGISTSHTTKLVPMTIASHQQQPIKQTIQVVSAGSTVVGGGSAIRVSAGERSSP
STLALQAGTMKVTNPAILSQVAALQGQPMSVAVRTPTQSPVRIQTSALQTQQTAQTQQQQ
QQQQQQNQQQGQQQSGIGQ
NT seq
8700 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgagagaaactagtgtacataatgaaaccaccacttcaagccataatgtgaca
gatattactcaggctgttgctgggggtattgcccccagcagcagcagtaacaatagcagt
ggtggtggaggaggtggtgcagagtgtcagttggtacagcagttagttagtcctgtgaag
gctggcagcatggggtgtggtgaaggggagcttgtgaggctcactgatccccgcacgctt
cattcctacacaccccgcacctctcctgtgccttctacctatacaactcctgtactcact
gaagtcactcctacctcgactccctcgtcttctcccagaagaccgccaccttccatttcg
ttgcagcctcctgccaaacgtattaaggttgaagaaaagcccttcgatttattagaacta
cggaaggttattactgactggaaaaaagccaaattagaaggtgtaaaagaaaaatataat
gatcatttggttgaacttttttttttagaaagagatggcaatatgatggactatcagtca
tggagtagacgtcctactcgagagtttcttcaattcattcgtcatcacaaacttgaagga
gatgaatctttagaggctaagttcactgttcccaatccattacacttaacctcaggtgtc
caaataaaaacagaaaacccctcaggacctcagtcacctttgaaaggtgtcttaggtgct
aatgttaggacttcctcatctccggttaaacctgggaagggcctggcaagtccagcaatg
ggagcgcgccagaaaatgccctcaacaagtgaaaatattcaggttacacagcaggatcaa
atggtggaaaaagcaaggcaggaagcttatgttatgcaacgaattgcctcgctgagaaaa
gagggattgtgggcagaaaaaagattaccaaaagtgcaagagcctccaagagctaaggct
cattgggattacttgttggaagagatggtgtggcttagtgcagattttgctcaagaacga
aaatggaagaaagctgctgctaagaaatgtgcccgaatggttcaaaagtattttcaggac
aaagctttgcaagcacaaaaggcagagaaggaacaagaaatgagaactaggaagatagct
gcgtatattgctaaggaaattagaacgttttggggtaatgtagaaaaattagttgaatac
aaagtgacaacaaagctggatgagaaaaagaaaaaggcccttgaccaacaattgagtttc
attgtggatcaaacagagaagtattcatcatggttagctgaaagcatgaacaagccagca
gattctgctgcagcatccacacgttccaatactccttcccgtgatagtcgcatgtcagat
gaggaattccgtcctgaggagtcttccgatgatgacgagggaacaattgctcgagaggat
gacaatccagaagagcaagcttcagaactgcaactattacacgaggagtctaaacagaca
ctggaagatttgttaaaggatcttccacctggctatctagagggaggggatatttccttg
gacaacagcacagaaaacttggattctttaggggagtgtccggacagtgttgaggagaaa
gatgaggaaaaggtgaaggaagaagtgataggacacgaggtgactattgagaaagacgaa
aaagatgtagatagtgtaagtgataaaaaaaatgttagaaatattaaaagaagaaaagtg
aaactcaggacgggtgataatattagtgagattgacaaagatgaagatcaagactttaaa
gtcgaagagtcagacgaagacaatgaggacacaattgaggaacaggaaaagaaagaagaa
gaaacagaccaccaacaagaaataaatgaattgcaggctgaaaatgaactatctgtggaa
gagttaagaaagaagtatgcagaattagctgctaatgctgagcctatggaagaagaagag
tctgaagatgatagtagtgaggatgaagaagaggatgatgtcaatgatgatgaagagatg
gttgttgaagaactagaagatgaagggaaacaggaatcagagaaggaagatgagtgtagt
gatggagatgaagagatgcccagtgatgaggaagaggaggaggatctaagtttgggcttg
gaaactcttatgaaagaaaatcttgaaaaggattctaaggttgacagtgaaaaggcagat
aaggaattgcaggatgcttcagctgtagcagaagctttgcagccaaagggctttacattg
tcatctacttctgtcactacacccatccctgtgttgctcaagcatacgttgcgagagtac
cagcatgtgggtttggactggctcaccaccatgtttgaaaagaagctaaatggtatactt
gctgatgagatgggcttggggaaaactattcagaccatctcccttctggcacaccttgct
tgtgaaaagagcaactggggacctcacctgattgtagtgccaacctctgtcatgctcaac
tgggagatggagttcaagaagtggtgcccagccttcaagatactcacatattatggcacc
caaaaagaaagaaagatgaaaaggcaaggttggacaaaaccaaatgcattccatatttgt
attacatcatacaagctggtgattcaggaccaccagagctttagaaggaagaagtggaag
tatttcatccttgatgaagctcaaaatataaaaaacttcaaatctcaacgttggcagttg
ttgctaaactttcaaagccaaagacgcttattacttacgggaactccgcttcaaaacaac
ttgatggagctctggtcactgatgcacttcctaatgcctaatgtttttgcctcccatcgg
gagtttcgtgaatggttctctaatccaatgacaggcatgatcgaggggaataaggagtac
aatgacaccatcattaaaagattacacaaggttttaagaccattcatattgagaagactt
aagtctgaagtggaacaacaaatgcccaaaaagtttgaacatgtagtaatgtgtagatta
tcaaagaggcaacggttcctatacgaagaatttatgtcaagagctaaaactagagagacc
ttggcagctgggaacttcttaagtgtaatcaatgtgttgatgcaacttcgaaaagtgtgc
aatcatccaaatctgtttgaacctcgccctacagtgtctccttttatgatggagggcctc
tcctacaatgttccatccatcatttggggcctcattgattatgacccatttagggaagtt
gacttattctgtctaaattttcttctggccgatttggaattgtgcttgacagcatttgct
gctcatcgtattcgcaagttccaagctcctcgccgacttattgaagaaatagattctgct
ccagatccacctccaaagtgtccagctggaaagatcaaacttcatgtacggccatctagt
caaagtgtgcctaagactggcgtatcgccagcaagcactccaagagtacctactccagtt
ggagctcttcgtgctcccgtgccacaaacaccaaccttagcttctaccagcaccactacc
accaccactaccaacttgcagggtggaggaatgcggttccagctggttcagcaaggagga
acaattaaagccatacaagtaccagtaactggagctagtggaggaatggttgtgcagcag
actcctcagggaccacgtctggtgataccacagcgaactacattaggagtgcctggtgct
acagcatccattggaggagcacctactacaggagcctctgccatgggtggattacagctg
cttcaaacagcatcaggtcagcttctactcaccacagctccagtacagaagccagcaaat
cccacattatctcaaggggtgagtggcactgctgcagcggctcttcttcagcggttacaa
ggcttgaaaggtttgcaaggctctatgatcactactggggctgggggaagaccagtgctc
cgccttcctctccctacgagtaatttcagaccacaaacacagattttggcaaccggtaac
aaccaaactacagctgctatccgtgtatcatcacctgccgcccctctacaaactactcct
gtggctagtccagtgagaacagggccatcgtctcctgctgctcgggctcctcctccaagc
accacacctaccaagcccatcacaaggattgaccaaagggagctggaacgacaggatgaa
aagaaaaaggaagaggagagaaaacgaaccttattctgtttgaatgaccttgaagaaaga
agacgcaagagaaggaaagacaagctttctcttatatctcggttaaatacacggcggtgt
caggcatgtcccatatatggttcagacctgatagaagctgtttctgtaattaatccgggt
catgggaccacctacagttatgggaaatggaatggcaaaggaatggttcactgtcttcat
gcaactgaactgaaatctcgtcaatattggtttgaaacagagtctctgcacaacctagta
cagactccagaaacctatttaaagcttttgaaagataccactgacagatatgtgttttgt
ataccatcagtggtggcaccacttatttgtatgagaatgagccacccgccgccatccaaa
ctctgggcacaagaaagaatgaaagcattattaaaaacacatgcttcacctgccattgcc
ccacttcatcacataatgaatgcagcagtcacccagttcccagaccccaggcttattcaa
tatgattgtggcaagttacaaacattggatcgcctattgcggcagttgaagacaggcggg
caccgaatccttatcttcactcaaatgacaaaaatgttggatgtttttgaagctttccta
aattatcatggccacctatacttgagactggatggaactaccagagttgatcaaagacag
gtattgatggagaggtttaaccaggacaagagaatctttgcttttattttgtcgacgcgg
tctggaggtattggtgtgaatcttacgggtgctgatactgtcatcttttatgattcagat
tggaacccaaccatggatgcccaggctcaggatcgatgtcaccgaatcggacagacaaga
gatgtacacatctaccggctcatatcagagaagactattgaggagaatatcttgaagaaa
gccaatcagaagcgtcttttgggtgatttggctattgaaggtggtaactttaccacggct
cacttcaaaaagtcaacaatacaggatctgtttgaagtgaatgtgaatgaaaatgatgct
tcaaaaagaatgtctgaagttattgaaaagagcaaaccaccagatgagggcaaggaagtt
accgagggagaaaaggtgaaaatgggagcctttgagagtgccttagctgcagctgaggat
gaaacggacgttcaggcagctaaaactgctaaggcagaaatggctgcggagttggccgaa
tttgatgaaaacattccaattgaggaaggagaaggtagtgaggagttgagcaaggctgag
caagaagttgctaatctcatgaaacagctatcaccagtagagagatatgcaatgaagttc
ctggaatcttcggatgatggctgggcagcagaagcagagcgaatggctgcagagattgaa
caacaaaagaaggaatgggagcttggacgtttgcaagctcttaaggaggaggaggagcga
ttggcacacaattcagatgaagatcttcttacctacacatcagcagatgcacacaatcag
ttgtggttgtcactatgtgggagagaagagatgccgatatggcaccctccaactcctcca
cgagatgataatgacgtctatattgatcacgcactcggtttctggtatgattctagtaca
atgccagaatctgctctgcctcctgtgtacatcaagaaggaacataaaagactcaaattg
gaaccaggtgcatcaggagatggatcctgtggattgcgccgacctcagaaacttcgccgt
gaagatgctgtgtgcgctcctcgttccctctttgatcgaccctcacctgctgttgttaag
atacgccgagatcttaaacttcagaaatatagaggcattgtccggcccagcattccactt
ccgggtttaaaaccagccattttgactaaacctcctgcagcagaacctgagaatactcca
gagtggacagtacatgaagactgggctgttgtccaagcagtgcagcagcacctccagttg
gaattgcctgttaatctgcttgtgttatcacctggtcacactcctaattgggatcttgta
gctgatttagtaaattcaatatcgcgctgctaccgctcaccacgccactgtaggactcgg
tatgagagtaccatccttcctcgtgaagaaggaaagttaccaccagaagtaaccaccaaa
aaaatatcaaagaagcaaaaatcaggagttctttcaaagcctatacacaaaagctcacgt
ccaatgcgaacttcacagttgtttgctcaggataacaacagcagtttctcctctctgtat
tgcactcggtttgaaacaattaaaaatatagccataaaacgcaccccaacaaccaaacca
ccactagtaaatcccactcataaaaatcccaagcatgctcaagtgcttgcagaatcagga
attcagtatgatggtcctctcaatccaggtcaggtagctgcaaatcttgcagaacgcatt
cagcgtgcaaaacaaaaatctcaggctgaacttgctcaacaacagcaacaaaaacttctt
cagcagcaacagcttcaacttcaacaacagcagcagcaacagcaacaacaaatacagcaa
gctcagcttactgcaaaccaactacagcaacagttgcagcagcagcaacaaccccagcaa
aatcaggtacaacaacaaactgtgcaacaacaggcccaacagcaacaaggtcagcagcag
gtttcagtggtaggaaacaccacggctcaacaagtagtcagtagtggtctgtctggcaag
gtagctacttcagttgtgctcagtcaaggagcagctatgactgttgccactgtcacggct
gccacagccaccactactgctgcctcgtcttcaactactgcggcaattcttggtggtgtg
cgcactgcagctggggttgctaatgctggccggaccactttagccctccaggaactacag
gttcgaacatcagggagtaatcaaggcacagtagtgagtgttgctggtctggcccagtta
caggctgcaaaacttacagcaacattgtcatcgcaatcttctacacaaaaaggtgttact
acagttccaagatcattaactccagcccagttgcaatacctgaaaacacaagcccaggca
agacaagcccttgcattgcaacagcaacaaggcaaggtggtggctacaggtgaccagacc
attaagagggttcagatagcagggcaggcagggacgacacagaaagtgcaagtagcagtg
tctggtggaactttggcagctgttacagctatacaggtaagccaagcaggacgaacacaa
ctggtgaagcctggcacagtgatggctggagcaagtggagtgatgactgctggaaaagct
gtgacccggacagtgacagacagagaagttgctgcacttctcaagcaacaacagctcaac
aaatctggacaagtcgctcaggtgcaagtaccctctgcacaactcttggctggccttcaa
gttcaggggagtgtaagtggtggtacaccagtggcaacattagtaaagactgtcagtgct
cccagtactatggtacacacaccaaccacagtaactctgcctgtgtctgctattaacgtg
acacttcctcaagctagagttaccactgcagccactgttgctaaggctgccaccacccaa
cagacagtgcgaaatatacctttaccacagcagctattggcaaagcagagatcactgatg
ggagttaaaggtgctgttgggctacaattaggcagtaaaggtgtaggtggcactgggctt
aacacagtgcagatagtacagggtggtggccagaaacagatgtcacatgtcacggtacaa
caaatacaacaggtttttaaacaggtgcctcaacagaccatccaacatattacacagggt
ggcacagtgagtggcactgtagtagggaaagcggtggggaacacagtggcaggcaccagc
gtcacaacgtcaggcagccaaggcattagcacctcccacactaccaagctggtaccaatg
accattgcatcacatcagcagcaacctatcaagcaaaccattcaggtagtgtcagctggc
tctacagtggttggtggaggttctgcaatccgtgtgagtgccggggagcgctcgtcacca
tcaactttagctctacaagctggaacaatgaaagtaactaaccctgccatactgtctcaa
gtggcagccctacaaggacaaccaatgtctgttgctgtcagaactccaacacagagtcca
gtcagaatacagacatcggccctccaaactcagcagacagcacagactcaacaacagcag
caacaacagcaacaacagaaccaacaacagggacaacagcagagtggcattggccagtaa
DBGET
integrated database retrieval system
