Procambarus clarkii (red swamp crayfish): 123746087
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Entry
123746087 CDS
T07930
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123746087
Membrane trafficking [BR:
pcla04131
]
Protein recycling
Others
Retriever complex
123746087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
123746087
NCBI-ProteinID:
XP_045583302
LinkDB
All DBs
Position
78:18491088..18524564
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AA seq
972 aa
AA seq
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MSVVWKIAVRQWGLEKNPLVPKPTSSHPLQGVKDRTLKHAGQVYDKKSRPAVQPIMVDPL
SSVLDGPDPLSDLLSASDPLSGKAFPTASFQILEENRETEMTIVDSRHSTWEQHRAFILT
NFTTTGTLTFTSSFLQPSDSAESRAVPLHRRVVKTQTAVTERHRTTGMSGSERIRARLEQ
LDTLDEIGGGAVREVGGLTQDEFTYRLNGLKQELIESWNSDQRVKALKIAIQCVKLLSLS
APEHFYPSKFVLVIDILDTLATLVYQRLKLKSETGNFAAGGSSAGKLEAQETARNWFYKV
ASIRELLPRLYLEAALLPCYSIFNAQEGEQALSRLSRMIRGIGDPLMAAYARMYVCRMGF
EVAPSLTQYISESIEDFLHALKQGLWPEGEADMNMGEDKDSLAVRVFSPPLRWMMQCLAS
SAPHHVLQSVLRQCEGGEGLGQNLLVSAVLTTFPNHFVASQALPLTHLIAGCSSPGKVEH
ELLSALGGCVNQAAPPQHQQLPLLNAVWKLIARIPRTKDYLSTAGIWLEYTAKHFTSVEV
NTLLGDVLKHVGADGSRDQAHYPALLALVSTALTNSTDPHSLFSMKHFVGLLNVFQRDSV
SAGDGVTRGVVEALLSHHPGNFTDPTLVQHLLTLCGALHDSINALTTDDERRQLSQLIIS
FIRQVNFGRDFEQQLDFYVNARAAFSNLDPVLVSLVQCVCQLAMATWKVMHGQHSGKTGS
FVRACAAYCFITVPSLASSVMRLKLYLLSGTVALLNNCLGQGDACMKAAIREVLEVEGSA
ETGPTPDVLRLLVGNLASTLVATPDPPDASPPLYLLRGLTNALRSNSWQKDTDIQAVLSI
SLLHALSAASQDTLPYHIHSVEGNDSLYGGDSQVQQEAEQLCTAILHNILSYMQSLTGIH
EKRCGTLALTLLWCIVTWCDLTQPQMMKVASQMWSLVLKHSHPESVVQARDWISRRSVQY
KDGSLAQLVRQC
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggtttggaaaatagctgttcgacaatggggcttggaaaagaatccattggta
ccaaagccaacctcaagtcatccgctgcaaggggtgaaggaccgaactctgaaacatgca
gggcaagtatatgacaagaaaagcaggcctgctgtgcaaccgattatggttgacccactg
tcatcagttctggatggtcccgatcccctgagtgatcttcttagtgcttcagatccgtta
tctggcaaggcctttccaactgcttcatttcagatattggaggagaatagagagacagag
atgaccatcgtggacagtcgacatagtacctgggaacaacaccgggcattcatacttaca
aattttaccacaactgggaccctcaccttcacttcaagtttcctgcagccgtcagactcg
gctgagagcagagctgttcccctccacagacgcgttgtgaagacccaaacagcagtaaca
gagaggcaccggacaacaggtatgagtggcagtgaaagaataagagcaaggctggaacag
ttggatacgttagatgaaattggcggtggagcagtgcgtgaggttggaggacttacccag
gatgagtttacttatcgtctgaatggcctcaagcaagaactcatcgagtcatggaactct
gaccagcgtgttaaagctctcaagatagctattcagtgtgtgaagttattaagcctgtct
gcaccagagcatttctaccctagcaagtttgtccttgtgatagatatcttggacacacta
gctacacttgtctaccaacgactcaagctcaagtctgagactgggaattttgcagctggt
gggagtagtgctggcaaactggaggcccaggagacagctcggaactggttctacaaagtg
gcttccatcagagaactcctcccaagactttatcttgaagctgctcttttgccttgttat
tccatcttcaatgctcaagaaggagaacaggctctttcaagattatctcggatgatccgt
ggaattggtgatcctctgatggctgcttatgcacgaatgtatgtgtgccgcatgggcttt
gaggttgcaccatcactcactcaatatatatcagagagtatagaagattttctgcatgct
ctgaagcagggactatggccagaaggagaagcagacatgaatatgggtgaggataaggat
tctctggccgttcgtgttttctctccgccgctcaggtggatgatgcagtgtctggccagc
agtgccccccaccacgtcctgcagagtgtccttcgtcagtgtgagggaggagagggcttg
ggtcagaatttacttgtttctgccgtgctcaccacgtttcctaaccacttcgtagcctcg
caggcacttcctctcacccaccttatagctggttgttcctctccaggtaaagttgagcat
gaactgttatcagccctcggtgggtgtgtgaaccaagctgctcctccccagcaccagcag
ctcccacttctgaacgctgtgtggaagctcatcgctcgtatacctcgaaccaaggattac
ctctctactgctggcatatggctggagtatactgctaagcactttacatcagttgaagtt
aacaccctgcttggagatgttctgaaacatgttggggcagatgggagccgtgaccaggct
cattatcctgcactcctggctctggtgtctactgctcttaccaactccaccgatcctcac
tcactcttctccatgaaacactttgtgggtctactgaatgtgtttcaacgagacagtgtg
agtgcaggtgatggagtgacacgcggagtggttgaagcactgctctctcaccacccgggc
aacttcacagacccaaccttagtgcaacacctccttactctttgtggtgcactccacgac
tccattaatgctttaacaacagatgatgagaggcgacaattgtcccagctgattatatct
tttattcggcaagttaattttggacgggattttgagcagcaattagatttttatgtaaat
gctcgcgccgccttctccaaccttgacccagtgctggtttctcttgtacagtgtgtgtgt
caactagcaatggcgacttggaaagtgatgcacggccaacactctggcaagacaggctca
tttgttcgtgcgtgtgctgcgtactgcttcattacagtgccttcattagcttcctccgtg
atgcgcctcaaactctaccttctctcagggactgtagcattattaaataactgcttaggc
caaggagatgcctgcatgaaagctgctatcagagaggtgttggaagttgaaggctctgca
gaaacgggcccaacccctgatgttctgcggttgttggttggcaacttagcttctacccta
gttgctacaccagatccccctgatgcctctccaccactgtacttgcttcgtggtcttact
aatgctttacgatccaactcttggcaaaaagatacagacattcaagctgtcttgtcaatt
tcattactccatgctctctctgctgcatctcaggacactttaccttaccatattcactca
gtggagggtaatgactcactgtacggaggagattcacaagtacagcaagaagcagagcaa
ctttgtacagcaatattacataatattctctcttatatgcagagcctaactggaattcac
gagaaacgttgtggaacgctggccctgacgttgttgtggtgtatagtgacgtggtgcgac
ctcacccaaccccagatgatgaaagtggcctctcagatgtggtcattggtgcttaaacat
agtcatccagaaagtgtggttcaagcgagggactggatatcaagacgttctgttcagtat
aaagatggaagcctggctcagctagttagacagtgctag
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