Procambarus clarkii (red swamp crayfish): 123746121
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Entry
123746121 CDS
T07930
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcla03009
]
123746121
Enzymes [BR:
pcla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123746121
Ribosome biogenesis [BR:
pcla03009
]
Eukaryotic type
Pre-60S particles
Helicases
123746121
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
123746121
NCBI-ProteinID:
XP_045583358
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All DBs
Position
LG87:complement(6211018..6227551)
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AA seq
592 aa
AA seq
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MDTSWDNLPVKLLAPVKRTIQDFGFQSMTPVQAACIPLLLSHKDVAAEAVTGSGKTLAFL
IPIIQILKQREDPLKKHDIGALIVSPTRELATQIHEVLQGFLKYCPQITSMLTVGGSFAG
DDLQTFKSRGAHILVSTPGRLEDLLARNTFEGPSLAAGVKALEILILDEADRLLDLGFFS
TLNTIFAYLPKQRRTGLFSATQTSDVISLIRAGLRNPLQVKVKEKDATGDDRTPLSLHNY
YMVCEEEKKFDILVKLLQDRESKKTMLFLPTCACVEYFTIVLKELLKNIQFLSLHGKMKE
KRFKVFDKFRALKSGVLLCTDVMCRGVDIPSVDWVIQYDPPSTASAFVHRCGRTARSGNE
GSAIVLLRPCETDYVEFIELNQKVTLNPLDSPTDVPELLKKLRKLQLQDRSVMDKANRAF
VSFIQSYAKHECNVILNVKSLSLGRTASSFGLLKLPKMPELKGVNVTDFVPVKMNYNTIA
YKDKQKEKSRQQKLSIYRETGQWPGMKPYTPKPEPWSQKKDKMEKKKKRHEKKLKRGHQF
TQEDLDDLEEDFRMVKKLKRGKVKTKDFDKHFGCDVDDETQEDDEGDASRNK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggatacctcatgggataatcttccagttaaacttttggctcctgttaaacgaactatc
caagactttggtttccaaagcatgacccctgttcaggctgcttgcatcccattgctgctc
agtcacaaagatgttgcagctgaagcagtaactgggagtgggaaaacgttagcattcctg
attcccatcattcagattttaaaacagcgtgaagatcccttaaagaagcatgacatcgga
gctctcattgtgtccccgacccgggagttggccacacagattcatgaagtactacaaggg
ttcctaaaatattgtccacagatcacttccatgctaacagttggaggatcatttgctggt
gatgacctccagactttcaaaagtagaggggcccacattttagtgtccacaccaggacgc
cttgaagacttgctggctcgtaatacatttgaaggtcccagtcttgctgctggtgtaaag
gccttagaaatattgatccttgatgaagctgacagacttttagacttgggtttttttagt
accttgaacactatctttgcttatctccctaaacagagaagaaccggtttattttctgct
acacaaacttcagacgtcatcagccttattcgtgcaggattaaggaatcctttacaggtg
aaggtaaaagaaaaagatgcaacaggggatgatagaacacctctttctctacataattat
tatatggtgtgcgaggaggagaagaaatttgacattttagttaagcttttgcaagacagg
gaatcaaagaaaacaatgctctttctacccacttgtgcttgtgttgaatatttcacaatt
gtattgaaagaattgttaaaaaatatacaatttttatctttgcatggtaaaatgaaggag
aagagatttaaggtatttgataagtttcgagctcttaaatcaggggtcttattatgcaca
gatgtaatgtgccgtggtgtagatataccgagtgttgactgggtcatccaatatgatcca
ccctctacagcttctgcatttgttcaccgttgtggccgcactgcaagaagtggcaatgag
ggttcagcgattgtcttgctacgaccatgtgagacagattatgtagaattcatcgaattg
aaccaaaaagttaccttgaatcctttggattctccaacagatgtacctgaacttttgaag
aaattaaggaaactacagctccaggatcgttcagtaatggacaaagcaaatcgtgcattt
gtgtcatttattcagtcatatgctaaacatgagtgtaatgtgattcttaatgttaaaagc
ttgagtcttggtcgcactgcctctagttttggcttactgaaacttcccaaaatgcccgag
ttgaaaggtgtgaatgttactgactttgtccctgtaaaaatgaattacaatactattgct
tataaagataagcaaaaggaaaagagcaggcagcagaaactcagcatatacagagagaca
ggtcagtggccgggtatgaagccgtacacaccaaaacctgaaccttggtctcagaaaaag
gataaaatggaaaaaaagaagaaaagacatgaaaagaaactgaagcgagggcaccagttt
actcaagaagacttggatgatttggaggaagattttcgcatggtgaaaaaattaaaaaga
ggcaaagtcaaaaccaaggattttgacaagcactttggctgcgatgttgatgatgaaaca
caagaagatgatgaaggggatgctagcagaaacaaataa
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