Procambarus clarkii (red swamp crayfish): 123746331
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Entry
123746331 CDS
T07930
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123746331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123746331
Membrane trafficking [BR:
pcla04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
123746331
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
TPR_IF140-IFT172
Motif
Other DBs
NCBI-GeneID:
123746331
NCBI-ProteinID:
XP_045583732
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All DBs
Position
80:complement(23437803..23455485)
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AA seq
838 aa
AA seq
DB search
MICTWDQMAALWCIFLSKSGCTMPLARYFIPQTLLARRTLEQKRQVVQLKTASALSRVMA
LSDGNLYLLDSDVLNTIGSGPKIKNVTVFCVNENPNTLDPFTVQLCVGKRRCIQVCSLHE
DRVSFLKELSTPEPVNVAMDGNFVCVAGQGNYCVFNVETGSSQDLFPYDATTTYPHVKRI
AKEEFLLAGPGNLGMFVTAAGISERPPIQWMESISAVSYYHPYIITITNQFIRVYSLIDQ
QHKQTLNFSGGELVGNFDGQLYVAAHSCISCLMPQPWTVQVQTLMDSERVEEAVELAEHS
GAVGMSQEQYQQLFCTLLQKAGFIKLSHGVYDQAQEYFLRGSVDVREVISLYPGLLPATV
EFMRAQPPLHHIADIAQAMHGDQNKIEDAKTFLFGYLLHLRNFGEPIMYRTEVDTAIIKL
YAEKESSDLLLFLDSGDIVCNLPECAQWLEAHHQYSALAKLYRVLGDLDKSLEVLTRLVR
DEIKDKHFKGVQDLVDCLTYATDPNVVWRYSDFVLDRNSVEGIRVFTETNATLDPSRVLQ
VLQRYPEARLGFLHHLIDTKKVQDEKYHTELVLHYVDEAVRLISDGPASSERLEEVRVKL
QELLTSSCYYQPQPVLTRMHGTSLHVETAAVFGRLGEHEKALSMLVHQLKDFAAAEQYCI
AQTRGPNNISKSNIFLKLLKIYLRPPPGGSEDEIELAPAIELLSVHAGDLEVSAVLGLLP
PSWSLSIVHHYLRAALRNSLHQSRIKRIQQTLVRTDNIQQKFILYKLCKDMGPIPVASNR
ICCVCNRGFSSSEFSIYPNGVMAHLACAPNPSVCPLTGTVFQVSREVTKPKTKEQYSR
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgatctgtacctgggatcagatggcagcattgtggtgcattttcttgtcgaagagcgga
tgcacaatgccactggcaagatattttattccacaaacattattagccagaagaaccttg
gaacaaaaaaggcaggttgttcagttgaagactgcatctgccctcagccgtgttatggca
ttaagtgatgggaatctgtacctccttgattctgatgtcctaaacaccattggctcgggc
cctaagatcaagaatgtcactgtgttctgtgttaatgaaaatccaaatacactggaccct
tttactgttcagttgtgtgttggtaaaagaagatgtatacaagtctgctctcttcatgaa
gacagagtctcctttctaaaagaattgtcaacaccggagcctgtgaatgttgcaatggat
ggaaattttgtatgtgttgcaggacaagggaattattgtgtgttcaatgtggaaacagga
tccagtcaagatctgttcccatatgatgctactacaacctatccacatgtcaagagaata
gcaaaggaggagtttttattagcagggccaggcaaccttggcatgttcgtaacggcagcg
ggcatctccgagcgtcccccaatccagtggatggagagcatatcggctgtttcttactac
catccatacataataactattaccaatcagtttattagagtgtatagtttgattgaccaa
cagcacaaacaaaccttgaacttttctggtggtgaattagttggaaactttgatggtcag
ctttatgtggctgcccactcgtgcatctcctgcctcatgcctcagccctggactgtgcag
gttcagaccttaatggacagtgagagagtagaagaagctgttgagttggcagagcacagt
ggagcagttggaatgagtcaagaacaatatcaacagttgttctgtacactgcttcagaag
gcaggctttatcaagctgtcccatggggtctacgatcaagctcaggaatatttcctcagg
ggctctgttgatgttagagaggttatcagtttgtacccaggccttttgccagcaactgtt
gagttcatgcgagctcaaccacccctgcaccacattgctgatatagcccaagcaatgcat
ggtgaccaaaacaagatcgaggatgcaaaaacgttcctctttgggtacctcttgcatctt
cgaaactttggggagcccatcatgtacaggacggaagtagacactgccatcatcaaactg
tatgcggagaaagaatcttctgacctgctgctattccttgatagtggggacattgtgtgt
aacttgcctgagtgtgcacagtggctggaagcccatcaccagtactctgccctagctaaa
ctgtacagagttcttggtgaccttgacaaatctcttgaagttcttacacgacttgtgaga
gatgaaattaaagacaagcattttaaaggcgtacaagatttggtggactgcttaacctat
gcaactgacccaaatgttgtatggcgctactcagactttgtgttggatcgaaattcagtg
gaaggcatacgggtatttacagaaactaatgcaacgttggacccctcgcgcgtcttgcag
gtactccagcgttatccagaggcaagattaggatttcttcaccatctaattgacacaaaa
aaagtacaggatgaaaagtatcacacagagctggtactgcactatgtagatgaggcagtg
agactgataagtgacggaccagcttcttctgaacgccttgaggaggttcgagtgaagctg
caagaattgctcacttcctcttgttactaccaacctcaaccagtacttaccaggatgcac
ggtactagtcttcatgtagaaacggccgcagtatttggaaggctcggtgaacatgaaaaa
gctctctctatgctggttcatcagttaaaggactttgctgcagctgaacagtattgcata
gcacagaccagagggccaaacaatatatctaaatccaatatcttcctcaagctacttaag
atatatctacgaccaccacctgggggttctgaagatgagatagaacttgcaccagccatt
gaacttttgtcagttcatgctggggatttagaagtatcggcagtcttaggtcttcttcca
cccagctggtctctcagtattgtacatcattaccttcgagcagctttaagaaactctttg
caccagagtcgaatcaagcgaatacaacaaacacttgttcgcactgacaacatacaacaa
aagttcatcctgtataagctctgcaaagacatgggccccattccagtagcttcaaacaga
atatgttgtgtgtgcaaccgaggattctcaagctccgagttcagcatctaccccaatgga
gtgatggctcacctggcctgtgcgcctaaccccagcgtctgtcctctaaccggcaccgtt
tttcaagtctcgcgcgaggttaccaagcctaagacgaaggagcagtactcaagatga
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