Procambarus clarkii (red swamp crayfish): 123746350
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Entry
123746350 CDS
T07930
Name
(RefSeq) integrin alpha-5 isoform X1
KO
K06487
integrin alpha V
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04081
Hormone signaling
pcla04145
Phagosome
pcla04148
Efferocytosis
pcla04512
ECM-receptor interaction
pcla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
123746350
04512 ECM-receptor interaction
123746350
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
123746350
04148 Efferocytosis
123746350
09142 Cell motility
04820 Cytoskeleton in muscle cells
123746350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123746350
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcla04147
]
123746350
04515 Cell adhesion molecules [BR:
pcla04515
]
123746350
04090 CD molecules [BR:
pcla04090
]
123746350
Membrane trafficking [BR:
pcla04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
123746350
Exosome [BR:
pcla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123746350
Exosomal proteins of epithelial cells
123746350
Cell adhesion molecules [BR:
pcla04515
]
Integrins
Integrin alpha subunits
123746350
CD molecules [BR:
pcla04090
]
Proteins
123746350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FG-GAP
Integrin_A_Ig_3
FG-GAP_3
Integrin_alpha
BrxA
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
123746350
NCBI-ProteinID:
XP_045583766
LinkDB
All DBs
Position
80:complement(13863402..14025051)
Genome browser
AA seq
1087 aa
AA seq
DB search
MASSVDELDPRRWLLWEAFHVQFPRARFPGKRMLHLVIVLWLATRAALFNMDATRPLVLT
GNKKSQFGFSVAIWPNFGEPLLVVGAPQDAGGASVGEDEGQSKVRIIPGTVYLCDPINNF
SCSTHRTKFQPRYHGDVKRDLTRHGNGSYSMGFGSTVLAGSSTASPLLMCAPRASYFFRR
GTHHSVIPEGQCLLLPAGAHSPLRLRPNTTDVRYCGFSAAFGKDERVVYLGCPSTLDQNT
GHVLRFDLDDDLLPEERSLSRECGGAPYEAWAMTTTLKGSKDLVVTTSCSSRGHVVELTT
LGRREGAGGVGELLEEGAGGVGELLEEGAGGVGELLEEGAGGVGELLEEGAGGVGELLEE
GAGGVGEMLGAALEACDLDGDGEDEVVVGAPLGRVPLSSGYKETGKVLVIVPKHGVTHTL
EGTEDFAWFGNSLACLGDINNDGYKDLAVGAPQHSGGGAVFIFLGSNTGIRATPSQMLQP
TPKFSLSGGFGYSLAGGRDGDGNGYPDLLVGAPLSDAAFFFRTAPVLRLHVWSFEFSVKQ
VDLQERTCLEQGETWARRVCFHLRVQLRVVGGPDRFEIELAVRVVLDAGQPRQRVFFKDF
VTQVAETTIRLKNRIYQHEYQVYAEDLASEDDAVATSVANVQVRLIQVHQRESGELLPVV
EDPEKTDNTSVRLSCGNDTSSCVATTDVKLSLDNDTVPFLVGMETVEVRASLKVETNTAF
EPTLEIGKADGLLLQECRTEDTNVTFDCKSNGICSASRSKLRAGHQFDIVVVWKQEVAEL
LNSTQTHEDPGIRSRLSVRVINQESDPSNNHAVFTLLPQVAPAFTLYGRSEPETLSYNTT
GIPEEALPGNQGLPHQLSNHEDLGLAELGPTELSSTVNHTFTLTNLGLTVLLRTRVDIYW
PVRNRTAEAPFSRLKGAPTLTVPPGATYQCHTLLQSPSGTSLGPPEGDTDGPVVSCHSFE
CSLYRCEVSNVRREGKVTIHLEAVIIPDALKGMSGTVRLESWCRAEVESPSRSLVAGTLL
VQTMVLGTLLALPQEVPSTPVWVLVLASLGGLLLLATLVAGLYKVGFFKRIRPPKQPLED
PQIINKE
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcagtggatgagctagaccctaggcggtggttgctctgggaagcattccat
gtgcagttcccgcgggcccggttcccgggcaagagaatgttgcacctggtgatcgtcttg
tggctggccaccagggcggcgctcttcaacatggacgccacccggccgctggtgctcacc
ggcaacaagaagtcccagtttgggtttagtgtcgccatctggccgaactttggcgagccc
ttactagtggtgggagccccgcaggacgctggaggtgccagcgtaggagaggatgaagga
cagagcaaggtgaggatcatccctgggacggtgtacctctgtgaccccatcaacaacttc
tcctgttccacccaccgcaccaagttccagccccgctaccatggcgacgtcaagagagac
ctcacacgtcacgggaatggtagctacagcatgggcttcggctccacagtgcttgctggg
tcctccacagcctcgccactcctgatgtgcgcaccgcgggcgtcctactttttcaggaga
gggacccatcactccgtcatccccgagggccagtgtctgctcctgcctgcgggcgcccac
tcgcccttgaggctgcgacccaacacaaccgatgtccgatactgtggcttcagcgccgcc
tttggcaaggatgagagagtggtgtacctcgggtgtcccagcactcttgatcaaaacaca
ggacacgttctcaggtttgacctggacgacgacctgctcccagaggagaggagcttgtca
cgggagtgtggaggagcgccctacgaagcctgggccatgactacgaccttgaagggatcc
aaggacctggtggtgacgacctcctgcagcagcagaggacacgtggtggagctgacgacg
ctgggcaggagggagggagcaggaggcgtcggcgagctgctggaggagggagcaggaggc
gtcggggagctgctggaggagggagcagggggcgtcggggagctgctggaggagggagca
ggaggcgtcggggagctgctggaggagggagcagggggcgtcggggagctgctggaggag
ggagcagggggcgtcggggagatgctgggagcggccctggaggcgtgtgacctggacgga
gacggggaggacgaggtggtggtgggggcgcctctaggccgggtgcctctctcctcagga
tataaggagaccggcaaagtccttgttattgtacctaagcatggcgtcacacacactctg
gaagggacagaggacttcgcctggttcggaaacagcctcgcctgccttggagatattaac
aacgacggctacaaagacttggccgtgggcgccccacagcactctggaggaggcgccgtc
ttcatcttcctagggtccaacacaggcatcagggccacgccatctcagatgttacagccg
acgcctaagttctccttaagcggagggttcggatacagcctagccggtggcagagacggg
gatggcaacgggtatccggacctcctggtaggggcgccgctctccgacgctgccttcttc
ttcaggacggcgcccgtgctgcgattgcatgtgtggagcttcgagttcagtgtgaagcag
gtggatctgcaggagaggacgtgtctggagcagggagagacgtgggcacggcgcgtctgc
ttccacctccgtgtccagctccgtgttgtgggcgggccggaccgattcgagattgagctg
gccgtgagagtggtactggacgctggtcaacccaggcaacgggttttcttcaaggacttc
gtcacccaggtggctgagacgaccatccgcctcaagaacaggatttaccaacacgagtac
caagtctatgcggaggacctggcctccgaggacgacgccgtggccacctcggtcgcaaac
gtgcaggtgcgcctgatccaggtccaccagcgggagtccggcgagctgctgccagtggtg
gaggatccggagaagaccgacaacacctccgtcaggctctcctgcggcaacgataccagc
tcctgcgtcgccaccaccgacgtcaagctcagcctggacaacgacacagttcccttcctg
gtggggatggagacagtagaggtgagggcgtcgctgaaggtggagaccaacacagccttc
gagccaacgctggagattggtaaagcagacggtctccttctgcaggagtgccgcaccgag
gacaccaacgtgacttttgactgtaagagcaacgggatctgcagtgcttcccgcagcaag
ctcagagcaggtcaccagttcgacatcgtggtggtgtggaagcaggaggtggctgagctg
ctcaacagcacccagacgcatgaggaccccgggatcaggagcaggctgtcagtgcgggtg
atcaaccaggagagtgaccccagcaacaaccatgccgtcttcaccctcctgccgcaggtg
gcccctgccttcactctctatgggaggagcgagccggagaccctgagctacaacaccact
ggcatacctgaagaggcgctgccggggaaccaggggctcccccaccagttaagcaaccac
gaagatctgggtctggcagagctgggtccgacggagctgagttcgacggtcaaccacaca
ttcaccctcaccaacctcggcctcacggtcctcctccgcactcgggtcgatatttattgg
cctgtgagaaaccggacggctgaggcaccattctcccgcctgaagggggcgccgacgctg
acggtgccgccaggagcgacctaccagtgtcacactctcctccagtcaccatcaggaacc
agcctggggcctcctgagggcgacactgacggcccggtcgtctcttgccatagctttgag
tgctccttgtacaggtgcgaggtgagcaatgtgaggcgcgaggggaaggtcaccatacac
ctggaagcagttatcatccctgacgctctcaagggcatgagtggcactgtgagactggag
tcgtggtgtagggctgaggtggagtcccccagcaggagcctggtggcggggacacttctg
gtgcagactatggtccttgggaccctcctggccctgcctcaagaggtacccagcacccct
gtttgggtgcttgttctggcatccctcggtgggctcctgcttctggcaactctcgtagct
ggtctgtacaaggtgggattcttcaagaggattcggccacccaaacaacccttggaagac
ccccagatcatcaacaaggaataa
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