Procambarus clarkii (red swamp crayfish): 123746370
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Entry
123746370 CDS
T07930
Symbol
Ku80
Name
(RefSeq) LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
123746370 (Ku80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcla03400
]
123746370 (Ku80)
DNA repair and recombination proteins [BR:
pcla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
123746370 (Ku80)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA
Csa3_N
Motif
Other DBs
NCBI-GeneID:
123746370
NCBI-ProteinID:
XP_045583822
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Position
80:17843678..17878456
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AA seq
733 aa
AA seq
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MPPRCQVGEGIVVVMDVGPGVRAGVDKTFYSQSKKCLTNILQRKMFAEKCRDQVGIVLFG
TNDTNNNLASNDQYRHITVLRELQTVDWEVITEVDQLPYGKSSGDWLDALVVAMDLLHDP
DGGRFTSKKIVLLTDFSGEFSDDQTSKIIAGLKNQGIELNVIGPDIMDDDDDDAEDSDED
NPGPSTGVNSARNGKIQVAQNWNGKPKSAVQLAGEALVTRVVAEVDGIICSFDEAIPQLI
FFQKNSSNSAPWNTLLEIGPDFQIAITGRIKVKHSTAPSWKKMHAHKESAVITNETSYHR
YDDAQTVVNEEDVIPGYKYGTTLVPFSDEDAQMKYKSNSPRSLSILGFTRSSTVSHQRRA
GDQVLVITAREGDEAAAVAFSSLIQALQELDMVAVTRRIYNNNYNPVMGALFPDITAKYE
CLIWIPLPFQEEVRMYTFPSLQRLTENLNDNEIQAMDDLISSMDLSCQEEDGEEELAPTG
VLNPQLQHYFNTLTDRALHPHDPIPPPAPHVLNILETPECVCEARDKVVPSLKTHFPTKK
LIKKTKRDNKDLFASNDGDESTKKAKLDVNDSMSASDLTRPLVTHVTSATPVQDFLALLG
GEAPNFNLICKQLGEVVLQLVDGLGGGGTNAAVVAKVIDCLTSFRQESCSIDPSTYNKFI
SSLKEVVMTMSLHELWNRVKESGLGMINKEENARSIVGSDEAEEFLKLEQQSQQPVAPPP
AENDDVEDLLDDL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctcgatgtcaagtaggggagggaattgtggtggtgatggatgttggtcctgga
gttcgagcaggagttgacaagacattctactctcagtccaagaaatgcttaacaaacatt
ttgcagcgcaagatgtttgcagagaagtgtcgggaccaagttggcattgtgctgtttgga
accaatgacacgaataataacttggcaagtaatgaccaatatcggcacatcacagttctg
cgtgagttacaaactgtggactgggaggtgataactgaagtggaccaacttccttatggt
aaatcttcaggggactggctagatgctttggtggttgccatggaccttttgcatgatcca
gatgggggacgatttactagcaagaagattgtcctgttaacggacttcagtggagaattt
agtgatgaccagacctcaaagattattgcaggactcaagaatcagggcatagagttaaat
gttatagggccagatattatggatgatgacgatgatgatgcagaggactctgacgaagac
aatcctggaccttccactggagtgaacagtgcacgtaatggcaaaatacaggtggctcag
aactggaacggcaaacccaagtcggcagttcaacttgcaggcgaagctctagtgactagg
gtggtggcagaagttgatggtatcatctgcagctttgatgaggcaataccacagctcatt
ttcttccaaaaaaattcctccaacagtgccccatggaacaccttgttagaaattggtcca
gatttccagattgctatcaccggcagaatcaaggtaaagcactcgactgcaccatcatgg
aagaaaatgcatgctcacaaagaatcggctgtgataaccaatgaaacatcatatcatcgg
tatgatgatgcacaaactgtagtaaatgaagaggatgttattcctggttacaagtatggt
acaactttggtgccattttcagatgaggatgcgcaaatgaagtacaaatcaaacagtcca
cgcagtcttagtatattaggatttactcgttcatcaactgtgtcacaccagagacgtgct
ggggaccaggttttggtcatcactgcccgagagggagatgaggcagcagctgtggctttc
tcatctctgattcaagcattacaagagttggatatggtggcagtcaccagaaggatctat
aataataattataatccggttatgggtgctctcttccctgatattacagcaaaatatgag
tgtctcatatggataccattaccattccaagaagaagttcgcatgtacacatttccttcc
cttcaacgtcttacagaaaatttgaatgataatgaaattcaagcaatggatgacctgatt
tcttccatggatcttagttgtcaagaggaagatggagaggaagagttggctccgacaggt
gtactaaacccacagttgcagcattacttcaacactctcactgaccgtgctcttcacccc
cacgaccccataccaccccctgcacctcatgttttgaatattcttgagactccagaatgt
gtgtgtgaggccagagacaaagttgtgccgtccctcaagactcatttcccaaccaaaaag
ttgataaagaagaccaagagggataacaaagatttgtttgcaagcaatgatggtgacgag
agcacaaagaaggccaagttggatgtaaatgacagcatgagtgccagtgacctgactcgt
ccgttggtgacacatgtcacctcggctactcccgttcaagactttttagcacttcttggt
ggtgaagctcctaacttcaacctaatttgtaagcagcttggggaagttgtgctacagtta
gttgatggtcttggtggtggtggtactaatgctgcagtcgtggctaaagtgatagactgc
ctgacttccttccgccaggagtcgtgtagcattgatccttcaacctacaacaaatttatc
tcgagcctgaaagaagttgtaatgacaatgtctctacatgaattatggaaccgtgtcaaa
gaaagtggtctgggcatgattaacaaggaagaaaatgcaaggagtattgttggtagtgat
gaagctgaagaattccttaagttggagcagcagtcacaacagccagtcgcaccacctcca
gctgaaaatgatgatgttgaagatttgctcgatgacttataa
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