Procambarus clarkii (red swamp crayfish): 123747149
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Entry
123747149 CDS
T07930
Name
(RefSeq) polycystin-1-like protein 2
KO
K04985
polycystin 1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pcla03037
]
123747149
04812 Cytoskeleton proteins [BR:
pcla04812
]
123747149
04040 Ion channels [BR:
pcla04040
]
123747149
04091 Lectins [BR:
pcla04091
]
123747149
Cilium and associated proteins [BR:
pcla03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
123747149
Cytoskeleton proteins [BR:
pcla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
123747149
Ion channels [BR:
pcla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123747149
Lectins [BR:
pcla04091
]
C-Type lectins
Others
123747149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
REJ
Ion_trans
PLAT
GPS
GLV1-2
Motif
Other DBs
NCBI-GeneID:
123747149
NCBI-ProteinID:
XP_045585124
LinkDB
All DBs
Position
77:complement(17566049..17637572)
Genome browser
AA seq
1975 aa
AA seq
DB search
MTGSAFSLSRGYGQTLSLNPQELSVDPDNPGDTNFTVTWWCRQVDPVQETHLTDSSGNIE
VYNLHPVPAPLAAQNLTGGGCFGKGPGTLQYSGGSMTLVTSSFVKHSVTYEIFVRIAKDT
RQANTSLQVEVTMFPPPNVQIKCVDEKLCWPYDGGLLVNPSSRLALVGSCVSACSTNMAL
QWTITDMGGNSVVQTDTVNLGQVFLTSLTGTNIAANPLFFDLNPNIDRFRFRLTMETETF
TSGFAEVIMVPNGPPKSGACVLNTNSLRALLDSTVASCNNWKDPEGIGIDSYTFYYPHST
TEITLASSGFNTVNLIFPVGIFDVWCRIADKFGSFTNVYVGKVNASMITKEEFQSYNPSS
VLRNLAAIGDQTTMAMVLISLASIKDHADWLSLSDSSFSNMSASEINDRLTQVSNMNKES
LDFAADTMDFASLSQLSVGAGVLKSSACGVLTQEKAAFTVDMDFREKSLNFMNKMMGKLN
VTPIYSPYDIQPFASSFLDAAVCILKSMNEVIENPTLSPPGDLAKASSLDYETGIDQTKI
GFVIPLDPVTQMKQNVLEITRQRAKGMVQKMFQLVDSLGSVILGKCVVGENINEQGDSGG
GMLVTKISEDTLADGVEIRPQNSLNASVAFPGSFCPSRYSQNYSDCTNVVGFTAVVWPCL
THVYPESMTYLSKETTVITLSVFVEDENVTVDNETQPITLVIPRRPESLPDPVSVVGNTD
INDLVPFVYHSFNVSSADSAFTVEIHPDGNTPPKLVILIDYKRLPTPSQYDTISYVKNFT
LNENGTYSWFVNNIDNKNRTGNFYVAVAILKDNVTLPDPRSNATLQKENFSVDFNFNYTF
RVITSGCYFYNSTIDVWSGIGMTVVDANSTHTSCHTLHLTSFGSGYSPSPNAIDFDYIFA
AAGFVNNLIIYLVIIITLVCYVIMMIWARFMDKRDVQYRGVTALEDNKVEDKYLYEVTFT
TGPDKEAGTDSNIQFIVSGEYDETGVRALPPSDNRRYHRYSVDVFVMSTHGPLGNIDTLR
IWHDNTGRSPFDSWQLQTVVIRDLQTRDKFIFHANTWLALDHDDKKIDVLLEPSDGETNE
EFITGFYNKGNRGANEDHMWISIFLRPTGSRYSRKERVSVATLYLYLSMLINAACYHILS
DTPRTGVFEYSSFTLSIQQVIIGLASGIMAYPVIFLLVFIFKRSRPRKLKKCRSLEAAAK
QRRNQHIESGTDTEKDDLLTDYDLTTHQTRSNRSKDSSPVRCIPWWTRWLAWLLILAGIG
VCAFFVWSYGIMWGEIKSVKWFSSFIISFFISVLVTQWLKVLLTTTIGVVCCKAQNTMTE
DIDCDEELPELRYDEEWKNVQPMDPSVKRKVHVMGGVDSSEAEVAAIATRLTEKREMNVV
LRDVGSYCIFLLVLFVLVNGQTNYNAFLLQAQMTNTFIKIGNPQFDFSSKVTTTDQFWYW
MQNVILQELRAQRWYNGDPPYGLRGFLDDRANRILGYGIIRQIRSDPRRCKVPISMRNVI
HNCSGSRLDEIEDTRNFCDSWSAEEVVHGSCVYDEFRYKTAAELQTYSTQGILGTYSGGG
YVISLNSLEADDIQKLQTMPAMGWIDKYTRAVLVEFSIYNANVNLFSTCSIVAEFIEGGG
VTPSWRFEPVQLIQNPGSFGYIETLCQLIFVIVTVIFTLWELWKIKKLKWEYLSSYWNMA
EICIILTSYATIYVFVERYFLTQAAMEIFNNTYGDGYVRLDSAVYKDKLYLYLIALIVFF
STMKLIKLLQFNKRIDVLALTVRRCWDELIVSFIAFCIVFIAFNSVFYFIFMTELLDFTS
FLTSAATSFEILLGVFDFDSMYHASALSPVFFFAFCIINTVILINIMLTTIMVAFRDVKL
ELRHRKNKYDVIDFVWTQIRQTLRLEAEPDNSVAPNVEDVSLARGGPDDASTDQLPDKVN
QLMQYINDVYFDGHLNLSDPASMKQITQGQLPSASFHPYTTKSLSGGRNPVVSSD
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atgacaggctcagcgttcagtttgagtcgtggctacggtcagacgctgagtctaaaccca
caggaactctccgtggatccggacaaccctggagatacgaactttacggtgacgtggtgg
tgtcgacaagtggacccggtacaggagactcacttaacggacagtagcgggaacatagaa
gtttacaacttgcacccggtgccggcaccactggctgcacagaacctgacaggaggaggc
tgtttcggcaagggtccaggcactctacagtacagtgggggaagcatgaccctagtgacc
tcaagctttgtcaagcacagtgtgacctatgagatcttcgtccgcattgcaaaggacacg
aggcaggcaaacacctctttacaagttgaagttacgatgtttcctccacctaacgttcag
atcaagtgcgtggatgagaaactgtgctggccatacgacggcggtctccttgtcaaccca
tcctcccgcctggctctggtgggaagctgtgtgtccgcttgctccaccaacatggctctg
cagtggaccatcacagacatgggagggaacagtgtggtccagaccgacacggtaaatctc
ggccaagtgttcctgacatcgttaactggtacgaacattgctgccaaccccctgttcttt
gacctcaacccaaacatagacaggtttcgattcagactgacaatggaaactgaaactttt
acaagtgggtttgcagaggtgataatggttccaaacggtccgccaaagagcggagcttgt
gtactcaacacgaactcacttcgagctctgctggattccacagtggcaagttgtaacaat
tggaaggacccagaaggtattgggattgactcttatactttctattaccctcactcgacc
accgaaataactctagcatcatcggggtttaatactgtgaatctgatctttccagtgggt
atttttgacgtctggtgcaggattgcagataagtttgggagtttcacgaatgtgtatgtt
ggcaaggtgaatgcctcgatgattacaaaggaagaattccagtcatacaatccttcaagt
gttcttcgtaacttggcagcaataggtgaccaaacaacaatggcgatggtgttgatctca
cttgcatccattaaagatcacgctgattggctttcattaagtgacagttctttcagtaac
atgtcagcaagtgaaatcaacgacaggcttactcaagtgtccaatatgaataaagagtct
ctggattttgctgctgatactatggactttgcttcattatctcaacttagtgttggtgct
ggagtcttgaaatcctctgcttgtggcgttttgactcaagaaaaagctgcttttactgtt
gatatggatttccgggaaaaaagcctgaactttatgaataaaatgatgggaaagttaaat
gttactcctatttactcaccatatgacatacagccatttgcctctagctttttggatgct
gcggtttgcatcctcaaaagtatgaatgaagttattgagaacccaacactcagcccgcct
ggagacttggccaaggcttcttctcttgactatgaaacaggtattgatcaaacgaaaata
gggtttgtaatacccttagaccctgtaacccaaatgaagcaaaatgtgctggaaatcaca
agacaaagagcaaagggcatggttcagaaaatgtttcaactagttgactctcttggcagt
gttattttaggcaaatgtgttgttggggagaacatcaatgagcaaggagacagtggagga
ggaatgttggttaccaagatttcagaggacaccttagcggatggagtggagatacgccct
cagaatagtttgaacgcttcagtggcatttccagggtcattttgcccctctcgttatagt
caaaattacagtgattgcacaaatgttgtaggcttcacagctgtggtgtggccctgttta
actcacgtttacccagagagtatgacgtatctgtcaaaggagactactgtcataactctt
agtgtatttgtggaagatgagaacgtcactgttgacaatgaaacacagccaataaccctg
gtaattcctcgacgtcctgagtcattacctgatcctgtttctgttgtgggaaatactgat
attaatgatctcgtcccctttgtgtaccattccttcaacgtgtccagtgccgattctgct
ttcactgtagagattcatccggacggaaacacgccgcccaagttggttattctaattgac
tacaagagattaccaacgccatctcagtatgacacgatttcctatgtgaaaaattttact
cttaatgaaaatggaacatattcatggtttgtaaataacatagacaataagaacagaact
gggaacttttatgttgcagtagccatattgaaagataatgtcactcttcctgaccctaga
agcaatgctactttgcagaaagaaaattttagtgttgacttcaactttaactatacgttc
cgtgtgataacatcgggatgttacttctacaactcaacaattgatgtttggtcaggcatc
ggcatgacggttgtggacgctaacagcacccacactagttgccacactcttcatttaact
tcctttggatctggatattctccttcgccaaacgcgattgattttgactacatattcgct
gcagccggttttgttaacaacctgataatatacctagttatcatcataactctcgtttgc
tatgtaataatgatgatttgggctcgttttatggacaaaagagatgttcagtatcgagga
gttactgccctggaggataataaggttgaagataaatatttatatgaagtaactttcacc
accgggcccgacaaagaagctggaactgactctaacatccagtttattgtatcaggagaa
tatgatgaaacaggtgtcagagctctgccaccatcagacaacagacgatatcaccgctac
agtgttgatgtgtttgtgatgagcacccatggacccctgggaaatattgacaccctacgc
atctggcatgacaacaccggcaggtctccatttgacagctggcagctgcagacagtagtg
atccgcgaccttcagacgcgagacaagtttatatttcatgcaaacacctggcttgcttta
gatcacgacgacaagaaaattgacgtattgctggagccctcagacggcgagactaatgag
gaattcatcacaggtttctacaacaagggaaacagaggtgcaaatgaagatcacatgtgg
atatcaatattcctgcgacctaccggctcccggtacagtagaaaagaacgagtatcagtg
gctacattatacctgtacttgtcaatgttgatcaacgctgcctgctaccatatacttagt
gacacgcctcgcaccggtgtgtttgagtacagctccttcaccttatcaattcaacaggtc
atcattggcttggcttctggcattatggcttatcctgtaatttttctactcgtatttatc
ttcaaaagatcgagacctcgcaaactaaagaagtgccgctcactagaagctgcagccaag
caacggaggaatcagcacatcgaaagtgggacagacacagagaaagacgacctgttgact
gactatgacttaacgacccatcagacacgcagtaaccgcagcaaagattcgagtcctgtg
agatgcattccgtggtggacgcgatggctggcttggctcctcatactggccggcataggc
gtctgcgcgttcttcgtgtggtcgtacggaatcatgtggggagagatcaaatctgtgaag
tggttctcctccttcattatttctttcttcatatctgttcttgttactcagtggctcaag
gtacttttaacaaccacaattggagtagtttgttgcaaggctcagaacaccatgactgaa
gacatagactgtgatgaagaattgcctgaacttcgctatgatgaggaatggaagaatgtt
cagccaatggacccctccgtcaaacgcaaggtgcatgtgatgggtggagtggactcaagt
gaagcagaggttgctgctatagccactcgtcttacagagaagagagaaatgaacgtagtg
ctacgagatgttggctcgtattgtatcttcttgctggtgttgttcgttctggtaaatgga
cagacaaactacaatgccttcctcctgcaagcacagatgactaatacatttatcaagatt
ggaaatccacaatttgatttcagttctaaggtcacaacaacagaccagttttggtactgg
atgcagaatgtgatcttacaggaacttcgcgctcagcgatggtacaatggcgatccccca
tatggtctcagaggcttcctagacgaccgggcaaacagaatacttggttatggaataata
cggcagataagaagtgatccgcggaggtgcaaagttcccatctccatgaggaatgttata
cacaactgttcgggaagtcgattggatgagatagaagacacaagaaatttttgtgacagt
tggtcagcagaagaagttgttcatggttcttgtgtctatgatgagttccgatacaaaaca
gctgcagagcttcagacatactccactcaaggcatacttggtacttacagcggtggtggc
tatgtaattagcttgaattcgctcgaagcagacgacatacaaaagttgcaaactatgcca
gcaatgggatggattgataaatacactcgtgcagtcttggtggagttttccatatataat
gcaaatgtgaatctcttttcaacgtgctcaattgtcgcagagtttattgaaggtggagga
gtgaccccttcttggagatttgagcccgttcaactaatacagaatccaggaagttttgga
tatattgaaactctctgccagttgatttttgtgattgtcacagtcatctttacgttgtgg
gaactttggaagattaagaagctgaaatgggaatatttgtcctcatactggaacatggcg
gaaatttgcattattttaacatcctatgctacaatctatgttttcgttgaaagatatttc
ttgacgcaagcggctatggaaatattcaacaacacatacggagatggttacgtgaggctt
gactcggctgtttacaaagacaaactatatctctatttgatcgctctcatagtattcttc
tccacaatgaaactgatcaaactgctgcagttcaacaagaggatagatgtgctggcgctc
acagtacgccggtgctgggatgaactcattgtttccttcatagcattttgcattgttttc
attgctttcaatagtgtgttttattttatcttcatgacagaactactagacttcaccagt
tttctgacttctgccgcaacaagttttgaaattctattgggtgtatttgattttgattca
atgtaccatgccagtgctctttccccagtcttcttcttcgccttctgcatcatcaacacc
gtgatactcatcaatatcatgctcaccaccatcatggtggccttcagagacgtcaagctc
gagctacgacacaggaaaaataagtatgacgtcatcgactttgtatggacacaaatccgc
cagactctgaggcttgaagcagagccagacaacagtgtggcgccaaatgtggaggatgtg
tcgctggcgagaggcggtccagacgacgccagcaccgatcaactcccagataaggtgaac
cagctgatgcagtacattaatgacgtctacttcgatggtcatcttaacctgagtgaccca
gcatccatgaagcagatcactcaaggtcaactaccctccgcatccttccacccatacaca
accaagtctctgagtggaggacgcaaccccgtcgtctctagtgattaa
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integrated database retrieval system
