Procambarus clarkii (red swamp crayfish): 123747280
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Entry
123747280 CDS
T07930
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123747280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
123747280
03036 Chromosome and associated proteins [BR:
pcla03036
]
123747280
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123747280
Coactivators
SAGA/TFTC/STAGA complex
123747280
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123747280
STAGA complex
123747280
TFTC complex
123747280
SAGA complex
123747280
SLIK complex
123747280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
TFIID_NTD2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_WDR75_1st
DSE1_N
Beta-prop_SCAP
Beta-prop_VPS8
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_HPS5
CFAP251_N
Beta-prop_Vps41
Ge1_WD40
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_Nup120_160
ASA1
Beta-prop_NOL10_N
WD40_RFWD3
PAC11
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
WDR54
Beta-prop_NWD2_C
eIF2A
Tricorn_2nd
RMC1_N
Motif
Other DBs
NCBI-GeneID:
123747280
NCBI-ProteinID:
XP_045585310
LinkDB
All DBs
Position
94:complement(5138785..5160161)
Genome browser
AA seq
649 aa
AA seq
DB search
MKKFRTEKIMANVNEYLKRRNLENQTSGGTVTEQQAGVLGLVSPSTPNSFTFSTTSTHHS
HIDHQYVRLKSWMMEASEPCRSELSQVLFPLFIHLYLELVAGTGRQAAKKFFVKHYQVFL
VNRDYENTLSQVLNAANINASGDMNSSPIIQNLKSGKYLIRLSELTLNYFLRYLKATENP
ILLQIFNTYIEVEVDDSSAGSSGAVFRSPELNCNSSNALVNGHTPESMSSDSAITSADGL
DCSQEELQKMKDVMARIKLAHPAPPSLCVYTVSNAYNGLSCASVNTEGRLLACGFEDSVI
KMWKLTPPVHNVGFRKVSTVLGPRGGISHTLLACDNSRIEDDGDVREEEEREEEEMMAEA
RNGGRRRNRGGELFALRGHSGPILDTAFTHDSTYLLSVSEDTTMRLWDLESGQAVALYRG
HNYPVWCVGIAPLTMYVVTGSYDSTARLWTTDCTYPLRTMAGHTQSVDCVAFHPNGTYVA
TGSCDRTVRLWQVTDGDAARILLHHKAAINAVEFSPNGKYLASGSDDGAVVVWDLAGGRV
LTELSSGCQGSNGSTEVSPHLESMVGLCWSSDSSLLISASSDGCVRTSYLEQAPSSDGGA
TWELDEVCQVQCGGSTNGGMGSNGGGQLLHTSLTCHNYLTAVTALDVER
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatttaggacagaaaaaataatggctaatgtgaacgagtatctgaagaggaga
aatttggagaatcagacatcagggggaacagtaacagagcagcaagctggagtattaggc
ctggtgtctccctctacacccaatagcttcaccttctccaccacctcaactcaccattca
cacattgatcatcagtatgtcaggctcaagtcatggatgatggaggcaagtgaaccatgt
cgatcagagttgtcacaggtgttgtttcctctgtttattcatctttacttggagctggtg
gctggcacaggacggcaagcagccaagaagttttttgtaaagcactatcaggtattctta
gttaatcgtgactatgaaaacacactatcacaggtgctgaatgcagctaacataaatgca
tcgggagatatgaactcgtctcctattattcagaatctcaaaagtggtaaatacctgata
cgtctgagtgagctaactttgaattacttcttacgatacctcaaagccacagaaaaccca
attttactacagatctttaatacatatatagaggtggaagtggatgactccagtgctggt
agttcaggagcagttttccgtagcccagagctaaactgcaattcatcaaatgctttagta
aatggtcacacaccagagtctatgtcatctgattcagcaataacctcagcagatggactg
gactgcagtcaagaggagttacaaaaaatgaaagatgtgatggcccgtattaaattagct
catcctgccccaccatcattgtgcgtatatactgtttctaatgcctataatggcttaagt
tgtgccagtgttaatacagaaggcagattgctggcttgtggatttgaagacagtgtcatt
aaaatgtggaagctaactcctccagtacataatgtagggtttagaaaggttagcaccgta
ttaggacccagaggtggaatatcacataccctgttagcatgtgataattcacgtattgag
gatgatggtgatgtcagagaagaggaagaaagagaagaggaagaaatgatggcagaggca
aggaatggtggcagaagaagaaaccgtggaggagagctctttgccctaagaggacacagt
ggacctattcttgatactgcatttacacacgattcaacttacctactgtctgtcagcgaa
gacacgactatgcgtctgtgggatttggaaagtggtcaggcagttgctctttacagaggc
cacaactatcctgtgtggtgtgtgggaattgcaccactcactatgtatgtagtaactggt
tcctacgatagcactgctagattgtggaccacggactgcacatatcccttacgcactatg
gcaggtcacactcaatcagtagattgtgtagcttttcaccccaatggcacatatgtagcc
actggatcttgtgaccgaacagttaggctatggcaagtaacagatggggatgcagcgagg
atcctgctccatcataaggctgccatcaatgctgtagaattttctccaaatggaaaatat
ctagcttcaggaagtgatgatggagcagttgtggtgtgggatctggctggtgggcgggtg
cttactgagctaagtagtggatgccagggtagcaatggaagcacagaagtctcaccacac
ctagagtccatggttggcctctgctggtcctccgactcgtctctcttaatctctgcctcc
agtgatggctgtgtgcgcaccagttatcttgagcaggcaccatctagtgatggaggagct
acatgggagctggatgaggtgtgtcaagttcagtgtggtggaagtacaaatggaggaatg
ggtagtaatggaggtggacaactacttcatacctcccttacatgtcataactacctcact
gctgtcactgctcttgatgtcgagagataa
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