Procambarus clarkii (red swamp crayfish): 123747280
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Entry
123747280 CDS
T07930
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123747280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
123747280
03036 Chromosome and associated proteins [BR:
pcla03036
]
123747280
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123747280
Coactivators
SAGA/TFTC/STAGA complex
123747280
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123747280
STAGA complex
123747280
TFTC complex
123747280
SAGA complex
123747280
SLIK complex
123747280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
TFIID_NTD2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_Vps41
Ge1_WD40
Beta-prop_EIPR1
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
WDR54
Beta-prop_NWD2_C
eIF2A
RMC1_N
Motif
Other DBs
NCBI-GeneID:
123747280
NCBI-ProteinID:
XP_045585310
LinkDB
All DBs
Position
94:complement(5138785..5160161)
Genome browser
AA seq
649 aa
AA seq
DB search
MKKFRTEKIMANVNEYLKRRNLENQTSGGTVTEQQAGVLGLVSPSTPNSFTFSTTSTHHS
HIDHQYVRLKSWMMEASEPCRSELSQVLFPLFIHLYLELVAGTGRQAAKKFFVKHYQVFL
VNRDYENTLSQVLNAANINASGDMNSSPIIQNLKSGKYLIRLSELTLNYFLRYLKATENP
ILLQIFNTYIEVEVDDSSAGSSGAVFRSPELNCNSSNALVNGHTPESMSSDSAITSADGL
DCSQEELQKMKDVMARIKLAHPAPPSLCVYTVSNAYNGLSCASVNTEGRLLACGFEDSVI
KMWKLTPPVHNVGFRKVSTVLGPRGGISHTLLACDNSRIEDDGDVREEEEREEEEMMAEA
RNGGRRRNRGGELFALRGHSGPILDTAFTHDSTYLLSVSEDTTMRLWDLESGQAVALYRG
HNYPVWCVGIAPLTMYVVTGSYDSTARLWTTDCTYPLRTMAGHTQSVDCVAFHPNGTYVA
TGSCDRTVRLWQVTDGDAARILLHHKAAINAVEFSPNGKYLASGSDDGAVVVWDLAGGRV
LTELSSGCQGSNGSTEVSPHLESMVGLCWSSDSSLLISASSDGCVRTSYLEQAPSSDGGA
TWELDEVCQVQCGGSTNGGMGSNGGGQLLHTSLTCHNYLTAVTALDVER
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatttaggacagaaaaaataatggctaatgtgaacgagtatctgaagaggaga
aatttggagaatcagacatcagggggaacagtaacagagcagcaagctggagtattaggc
ctggtgtctccctctacacccaatagcttcaccttctccaccacctcaactcaccattca
cacattgatcatcagtatgtcaggctcaagtcatggatgatggaggcaagtgaaccatgt
cgatcagagttgtcacaggtgttgtttcctctgtttattcatctttacttggagctggtg
gctggcacaggacggcaagcagccaagaagttttttgtaaagcactatcaggtattctta
gttaatcgtgactatgaaaacacactatcacaggtgctgaatgcagctaacataaatgca
tcgggagatatgaactcgtctcctattattcagaatctcaaaagtggtaaatacctgata
cgtctgagtgagctaactttgaattacttcttacgatacctcaaagccacagaaaaccca
attttactacagatctttaatacatatatagaggtggaagtggatgactccagtgctggt
agttcaggagcagttttccgtagcccagagctaaactgcaattcatcaaatgctttagta
aatggtcacacaccagagtctatgtcatctgattcagcaataacctcagcagatggactg
gactgcagtcaagaggagttacaaaaaatgaaagatgtgatggcccgtattaaattagct
catcctgccccaccatcattgtgcgtatatactgtttctaatgcctataatggcttaagt
tgtgccagtgttaatacagaaggcagattgctggcttgtggatttgaagacagtgtcatt
aaaatgtggaagctaactcctccagtacataatgtagggtttagaaaggttagcaccgta
ttaggacccagaggtggaatatcacataccctgttagcatgtgataattcacgtattgag
gatgatggtgatgtcagagaagaggaagaaagagaagaggaagaaatgatggcagaggca
aggaatggtggcagaagaagaaaccgtggaggagagctctttgccctaagaggacacagt
ggacctattcttgatactgcatttacacacgattcaacttacctactgtctgtcagcgaa
gacacgactatgcgtctgtgggatttggaaagtggtcaggcagttgctctttacagaggc
cacaactatcctgtgtggtgtgtgggaattgcaccactcactatgtatgtagtaactggt
tcctacgatagcactgctagattgtggaccacggactgcacatatcccttacgcactatg
gcaggtcacactcaatcagtagattgtgtagcttttcaccccaatggcacatatgtagcc
actggatcttgtgaccgaacagttaggctatggcaagtaacagatggggatgcagcgagg
atcctgctccatcataaggctgccatcaatgctgtagaattttctccaaatggaaaatat
ctagcttcaggaagtgatgatggagcagttgtggtgtgggatctggctggtgggcgggtg
cttactgagctaagtagtggatgccagggtagcaatggaagcacagaagtctcaccacac
ctagagtccatggttggcctctgctggtcctccgactcgtctctcttaatctctgcctcc
agtgatggctgtgtgcgcaccagttatcttgagcaggcaccatctagtgatggaggagct
acatgggagctggatgaggtgtgtcaagttcagtgtggtggaagtacaaatggaggaatg
ggtagtaatggaggtggacaactacttcatacctcccttacatgtcataactacctcact
gctgtcactgctcttgatgtcgagagataa
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