Procambarus clarkii (red swamp crayfish): 123747312
Help
Entry
123747312 CDS
T07930
Symbol
Cpsf6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03015
mRNA surveillance pathway
pcla03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123747312 (Cpsf6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123747312 (Cpsf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123747312 (Cpsf6)
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
123747312 (Cpsf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
123747312
NCBI-ProteinID:
XP_069175864
LinkDB
All DBs
Position
94:complement(9109036..9163015)
Genome browser
AA seq
778 aa
AA seq
DB search
MADVDIDLYGDVEQDFTQDDFADGDLYDAVLTGGGREREREAPSSPTPASTERNGGTAPA
RQSSSQSQRGRSVSSEERSVFSGPVPHSGRKYQLYVGNLTWWTTDNDIAAAVQNLGVSDF
LDVKFFENRANGQSKGFCAISLGSENSSRLVMEKLPRKEIHGMNPVVTFPSKQALNQFES
QSKTRASPQHQHRGGPGGPGGHPGGGPGGPGGPRMPPPGRGMPPPGMEHRPPGPPGPHGS
HGGPHGGPHGGPHGGPHGGPHGGPHGPHGPHGPHGPPGPHGPPGGPHGGPHGPHGGPHGG
PHGPPHGPPHGPHGPPGPHGPPGMGPHHGPHPGPPRGPPPHNMQGPGPRPPPPPGHIQRP
MHPGGPGGPPPGHGPPPRGPPPNMGPPPGQHGPPPPRGPPPPMDPRAPPPRPDFIQGGFP
ATSSPPSVPHNLALSTRPPMMQGPPPHGAPPPHGPPPHGGGPPAPHVNPAFFPPHNAPPP
AAAAPPAHYAPPPPAHQHGFGGGDHRIEGPPPLSEAEFEDIMNRNRTVSSSAIARAVADA
SSGEYASAIETLVTAISLIKQSKVAHDDRCKILTSSLQDTLHGIEAKSYGSSKRRERSRT
PSRRHRRDRSRSREREYRDRSRSHSRERDYERHRSERERGTSDRTSERDRDYERSYSRER
EYDRARERDRERDRDRERRGRVSGGAAAVAPAASPPSATLHNSLQPRYYDERYRERDARR
ERIEERPVRERIEERSTREDVREPVRERERDRDRERERERDVRTREERESSSHRSSRH
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgttgatattgatctctacggagacgtggagcaggacttcacccaggatgac
tttgctgacggagacctgtatgatgcggtcctcacgggtggtggaagagaacgtgaacgc
gaggccccttccagcccaacgccagcttctacagaacgcaatggaggcactgcccctgct
cgtcagtcatcatctcagtctcagagaggacgttctgtgtcctctgaagaacgctcagtc
ttctctggccctgtgccacacagtggacgcaaatatcaactttatgtgggcaacttgact
tggtggacaacagataatgatattgccgcggctgtccaaaaccttggtgtgagtgacttt
ttggatgttaagttctttgaaaaccgtgccaatggtcagagtaaaggtttctgtgccata
tctttgggttcggagaacagcagccggctggtaatggagaaactacctcgtaaggaaata
cacggcatgaatcctgtggtcacctttcccagcaagcaggcccttaaccagttcgagtct
cagagcaaaactcgggcaagccctcaacaccaacatcgtggcggtcctggtggtcccggt
ggccacccaggtgggggtccaggaggtcctggaggacctcgaatgcctcctccaggtcgg
ggcatgcctccaccaggaatggaacatagaccaccaggtccacctggccctcatggttct
catggtggcccccatggtggtccacatggtggtcctcatggtggtcctcatggtggccca
catggtggtcctcatggcccacacggtcctcatggcccacatggtcctccaggtccacac
ggaccccctggtggccctcatggtggcccacatggaccacatggtggaccccatggtgga
ccccatggtccaccccatggcccaccccatggtccacatggtcccccaggaccgcacggg
cctccaggtatgggtcctcatcatggacctcacccgggtcctccacgtggacctccacct
cacaacatgcaaggcccaggaccccgccctccacccccacctggtcacatccagaggccc
atgcatcctggaggcccaggtggtccaccaccaggccatggtccaccccctcgtgggcca
ccacctaacatgggccctccacctggccagcatggtcccccaccacctcgtggacctcct
cctccgatggatccaagggctcccccaccaagaccagattttatacaaggtggcttcccg
gccacgagcagtcccccctcggtaccccacaacttggcactctctacgaggccgcctatg
atgcaaggtcctcctccacatggtgcccccccaccacatgggcctcctccccatggcggt
ggaccaccagctcctcatgtcaacccggccttctttccacctcacaatgctcctcctcct
gctgcagctgcgcctcctgcacactacgccccaccaccaccagctcaccagcatgggttc
ggtgggggtgatcatcgcatagaaggcccaccaccactctcagaggcagaatttgaagac
ataatgaatcgtaatcgtacagtatctagttcagcaattgctagggctgttgctgatgcc
tcttctggggaatatgccagtgcaatagaaaccctggtgacagcaatatcccttataaag
cagtcaaaggtggctcatgatgaccgctgtaagattcttacaagttcacttcaggacacc
cttcatggtattgaagccaagagctatggctccagcaaaagaagagaacgttcccgaaca
ccaagcaggcgacatcgtcgtgacagatcacgctcaagagagagagagtatcgtgaccgt
tcacgttcacattctcgtgagcgtgactacgaacggcatcgcagtgagagagaacgtgga
acatcagatcgtacatcggagcgcgatagggactatgaaagatcatacagtcgggaaaga
gaatatgaccgagcccgtgagcgtgacagagagagagatagggaccgtgagaggcggggt
cgggtgtcagggggtgcggctgctgttgctcctgccgcttctcccccctcagctactctt
cacaactctctgcagcccaggtattatgacgagcgttatcgagagcgtgatgcaagaaga
gagcgaattgaagaacgtccagttcgtgaacgtattgaagaacgtagcacgcgggaagat
gttcgagagcctgttagagaacgtgaacgggaccgtgaccgagaaagagagcgtgaacga
gatgttagaaccagggaagagagggaatcatcatcacaccgttcctccagacactaa
DBGET
integrated database retrieval system
