Procambarus clarkii (red swamp crayfish): 123747372
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Entry
123747372 CDS
T07930
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein
KO
K21988
transmembrane channel-like protein
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
123747372
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcla02000
]
123747372
03037 Cilium and associated proteins [BR:
pcla03037
]
123747372
Transporters [BR:
pcla02000
]
Other transporters
Pores ion channels [TC:
1
]
123747372
Cilium and associated proteins [BR:
pcla03037
]
Other cilia and associated proteins
Stereociliary proteins
123747372
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
7TM_GPCR_Sru
Anoctamin
Motif
Other DBs
NCBI-GeneID:
123747372
NCBI-ProteinID:
XP_069175841
LinkDB
All DBs
Position
94:complement(11460760..11485152)
Genome browser
AA seq
1905 aa
AA seq
DB search
MTTSSGETVVEVEESTADEVAETLRIHKEVLAGVNQQPWPIARKLRLARSAREYIQRHEG
ELEERLAQSSSTKDVLLRHFIRVRRVARAGVRAVYLWVAGLEPWQGRIKTIESHFGSAVA
SYFTFLRWVLGLNVALTALFAAFVIIPEFLASERSAAGERKSILREDRVRAYDFKVMWDF
EGVLRYSPVFYGYYSKIPTTREGYRLPLAYFLTSLAVYAYSFIAILRKMAANSRMSKLAE
DEECTFAWRLLAGWDFTIGNLEAAQNKVAAINTGFRESLLEAKELEKEEKSWKLRVRRVL
AHLIVLLLIMGSAYAVVLLVKRSEDVDGSSSWYRQNELTITLTLISMVYPNIFDVVGLLE
VRHPRNQLQWQLGRIMALNLLNLYTLIFALFSKVDDMDVEMIFQTTELGELKTNLTETYS
ISTTLDFTMGFSQTTPLLTDDPRSSWFSYIDSTDASNLPNALSMSMHDVLNASLPGINNS
LVDLLTTASWSLPPASPDPATLTAAGGQHLSHGATLATSLLAAAAFTGIPLSKSDPSLKE
PLPPHCHLVPHPCLMVPSISDVTTPTPTEATVAPTTTSKVNTGVTPLTTPTTLDYEDWLR
AAYDKVTEDPAPDDEGAIYIYDDDNITTNPTTVLLPGNTTTLLDSPRGTITTTLPDSSWG
TTTTLPDSPRGTITILPDSPRGTTTILPDSPRSTTTTSLDSPRGSITTSQDSPQRGVTTS
AESSWTTTIETRLGNESYLNSETLNGTDLLLNSLHLEETLDSNITSKDFSGNDATAYASK
KPFESTESVLTEISAPLLLDETATPDSVSREIFSPGDPIDHAESLPLTSERNGNSNEALE
HLLRAIPGIPARFNTLFLDYASENGAGQSDETINKHSLDTNDSPVRRMKREILKPYPKKR
EMAKEVNEKKRTRLKKNRDFNNQGENREIRVVDRRSRDLYKISRGINGKTQEQGGKNRVK
RVINDYEGLSIHDLLDSPRFKLETDGSIDFEPHFGEENKSFEMKNEALKTEAVNDLNVRE
SVEADQYSSVVPGDHLALTTHDRASYWDTMLKNLNAENGNASESLTYEDGAATRWSTEHS
TRPATWRMAEMGEPWSLTSEPEDDDCYIIVCDAPTEDTTLRSTQISRTAPTSPVYTSSAT
APLTSVTPTSPAPTEASEATVTATDFVSSISGSEASPPPLMGPESQHFLVQPMKNNPEKW
APLLPSKMRQRLRKLCWETMFGQEIIKLTVMDMVVTVVTIVIGDYIRAVIVRVFNNCCCW
DLEKQFPGYPDFKIAENILHLVNNQGMVWMGMFFSPGLPALNTFKLVVLLYVRSWAVVTS
NVPPETVFKASNNNNFYLLFLLTMLFLCTLPVGYAVVWLEPSWHCGPFSDYPRIYQLATS
TLIGGLPTSLYPVVDYISSPGVVIPAGLLLVLIIYYLLSLTAALREANSDLRDQLRHERS
AEKRKALDARSGIKGRPETPTTRWGRVVPLTPMPRARLDATSDPEKPIDKKSSLTGDIGP
LVPLPSSPRGKDDGSWPDDGTDLGQSEVFDDSLSEPRRAGKDTPTIDSGDTVMPKQEARR
HDKRKEVEKERGTESAPRSPYSRPKNRRNSSSHGIKDEDEISLSKIQRGRHRSSGSQHKS
TRMSQKRKESDDSGHRDSSTSVKAGHRQSIDSPKERRKGSGPQTDKLKHNMPQECVQELN
KVLQNKELKQGRSTRLVNKVDPQKTAEPDTPTKVIPPDYHRRESSILKIDDFRRNSQGKN
NRPQNGTQPGHQRSSSEDSQSMQTIPIIKISKEDSVERSLQQAKLERQEKMQEDPCTTSD
QQSLNNKDTVSFFPAERMGEELVKMKNNQPKISRQKHSKTKSVPKETDLDDPYILDYGDP
NQTSDTAALLGNGKMYKENVKQKAATEVALSSGTLSSDEDATLLD
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atgactactagctccggagagacggtggtggaggtggaggagtcgactgcggacgaggtg
gcggagaccctccggatccataaggaggtgctggccggcgtcaaccaacaaccatggccg
atcgccaggaaactacggctggcacggtcagcaagagagtatattcagcggcacgagggc
gagctggaggaacgtctggcccagagctccagcaccaaagatgtcctcctcagacacttc
atacgcgtcaggagggtggcgcgagcgggggtacgggccgtgtacctttgggtggcgggg
ctggagccatggcagggacgcatcaagaccatagagtcccacttcgggtctgccgtggcc
tcctacttcaccttcctccggtgggtgcttggcctcaacgtcgccctcactgctctcttc
gccgcctttgtcatcatccccgagttcctggcctcggagcgttcggcggctggagagcgc
aagagcattctgagagaggaccgggtcagagcatacgacttcaaggtaatgtgggacttc
gagggcgtcctccggtactccccggttttctatggctactacagcaagatccccaccacc
agagaaggttacaggctccctctcgcctacttcctcacttcccttgccgtctatgcttac
agcttcatcgccatactgaggaaaatggcagccaactcgcgcatgtcgaagctggcggag
gacgaggagtgtaccttcgcttggcgtctcctggcgggttgggacttcaccatcggcaac
ctggaggcggcacagaacaaagtggccgctatcaacaccggcttccgggaatctctgctc
gaagctaaggagctcgagaaggaagagaagagctggaagctccgtgtacggcgggtattg
gctcacctgatagtactcctgctgatcatgggcagcgcctacgccgtggtgctcctagtc
aaacgctctgaagacgtcgacgggtcctcctcctggtaccggcagaacgaactcaccatc
accctcaccctcatctccatggtctaccccaatatcttcgacgtggtgggactcctggag
gtgcgccacccgaggaaccagcttcagtggcagctgggccgtatcatggctctcaatctc
ctcaacctttacacactcatcttcgccctcttctcaaaggtcgacgacatggatgtagaa
atgatctttcagacgacagagttgggggagctgaagaccaatctaacagagacttacagc
atatcgaccacgctagatttcaccatgggcttctcccaaactacaccgctcctcacagat
gacccacgctcgtcctggttctcttacatagactctacggatgcctctaacctgcctaat
gccttaagtatgtccatgcatgatgtattaaatgcctcgctaccaggcataaataactct
ttagtggacctgctgaccacagcctcctggtctctgccacctgcgtcgccagacccagcc
accctgactgcagcgggagggcagcacttgagccacggcgccaccctggccacgtcacta
ctggctgctgccgccttcacaggtataccgctgtcaaagagcgatcccagtctgaaggag
cctcttccacctcactgtcatctggtgccacatccttgcctcatggtaccctccatatcg
gacgtcactacacccactcctacggaggccacagtagcgccaacaaccacctcgaaagtt
aacactggagttactccgctgaccacaccgacgacattggattatgaagactggctcaga
gctgcctatgacaaagtaactgaggatccagcccctgatgacgagggagcaatttatatt
tatgacgacgacaacatcactacaaatcccacaacggtgctactacctggtaacaccacc
accttgctggattcgccaaggggcaccatcaccaccaccttgccggattcatcatggggt
accaccaccaccttgccggattcaccacggggcaccatcaccatcttgccggattcacca
cggggcaccaccaccatcttgccggattcaccacggagcaccaccaccacctcgctagat
tcaccacggggctccatcaccacctcgcaggattcaccacaaaggggcgtcaccacctcg
gcagaatcatcatggacaactacaattgagactcgtctaggtaatgagagctacctcaat
agtgagacccttaatggaacagatctcttgctaaactccttgcatctagaagaaacgtta
gattccaacattacgtcgaaagactttagcggaaatgatgcaacagcatacgcttccaaa
aagcctttcgaaagcacagagtcggttttaacagaaatctctgcgcctctacttctagac
gaaacagcaacaccggattctgtcagtcgagaaatattttctccaggtgatcctattgat
catgcagaatcattgcctttaacgtctgaaagaaatggtaattcaaatgaggcgctcgag
catctcttaagagccattcctggcattcctgcaagatttaacacactttttctagattat
gccagtgagaatggggcaggccaatcagatgagaccataaacaaacattcacttgataca
aatgattctccagtaagaagaatgaaacgggaaatacttaagccttacccaaagaaacgc
gagatggctaaagaggtgaatgaaaaaaaacgtacaagacttaaaaaaaatcgagacttc
aataatcaaggtgaaaacagagagattagagttgtggatcgaagatctcgagacctatac
aaaataagtcgtggcatcaatggaaagactcaagaacaaggaggcaagaaccgtgtgaag
agagtcatcaacgattatgagggcttgagtattcatgatctgcttgattccccaagattc
aaactagaaacagatggcagcatcgattttgaaccacattttggggaagaaaacaaaagt
tttgagatgaaaaatgaagctttaaagactgaagcagtgaatgatttaaatgtgagggag
agtgtggaagcagatcaatatagttccgtggtacctggtgatcatctcgctctgactacc
catgatcgagccagctattgggacacaatgttaaaaaatctgaatgctgaaaacggaaat
gcatcggaatcgctgacgtatgaagacggagcagcgacacggtggtcgacggagcactca
acgcgaccagccacttggaggatggcagagatgggtgaaccctggagcttgacttctgaa
cctgaagacgatgattgttatattatagtgtgtgatgcgccaacagaagacaccacttta
agatccactcagatctctaggacggcccctacttcaccagtatatacgtcgagtgctact
gcaccactgacttcagtaacgcctacatcacctgcacccactgaagcctcagaggcaaca
gtcactgctacagatttcgtttcatcgatatccgggtccgaggcttcgccaccgccattg
atgggccctgagtcgcaacacttcctggtacagcccatgaagaacaacccggagaagtgg
gcgcctctgctgccgagcaagatgcgccagcggcttaggaagctgtgctgggagaccatg
tttggccaggaaataattaagctcactgttatggacatggtagtaacagttgttaccatt
gtgatcggggactacatccgggcggtgattgtgcgcgtcttcaacaactgctgttgctgg
gacctggagaagcagttccctggctacccggatttcaagatagccgagaacattctccat
ctcgtcaacaatcaaggcatggtctggatgggaatgtttttttcgcctgggctgccggcg
ctcaacacgtttaagctggtggtgttgctgtacgtgcgctcgtgggcggtcgtcacctcc
aacgtcccaccggagacagtcttcaaggcctccaacaataacaacttctacctcctcttc
ctcctcactatgctcttcctttgtaccctccctgttgggtatgcggtggtgtggctggaa
ccatcgtggcactgtgggcctttcagtgactatcccaggatctaccagctggcaacctcc
acactgattggaggcctcccaacctccctctaccctgtagttgactacatctcctctcct
ggtgtggtcattccagctggcctcctccttgtcctgataatctactatctattatccctg
acagcagccctcagggaggccaacagcgacctcagggatcagcttcgccatgagaggtca
gcggagaagcgcaaggccctggatgctcgctctggcattaagggacgccctgaaactcca
accactaggtggggcagggtggtgccactgacacccatgccacgggcacgccttgatgct
accagtgatcctgagaagccaattgacaagaaatctagtctaactggagacattggccca
ttggtccccctcccttcctctcccaggggcaaggatgatgggtcctggcctgatgatggc
actgatctgggacagtctgaggtgttcgatgactccctctcagagcctcgtagagcgggg
aaggacacgccaaccatagacagcggagatacggtcatgccaaaacaagaggccaggcgg
catgataaacggaaggaagtggaaaaagaaagaggtacagaatctgctccaagaagtcct
tattccagaccaaagaacaggcgcaattcctcctcgcatggaattaaagatgaagatgaa
ataagtttatccaagatacaaagagggcggcaccgaagctctggaagccagcacaagtcc
actagaatgtcacaaaaaaggaaagagtctgatgacagcggtcaccgagactcgtcaacc
tcggttaaagctggtcatagacaaagcatcgactcgccaaaggaaaggagaaaaggatcc
ggacctcagacagataaattgaagcacaatatgccacaggaatgtgtccaggagctgaac
aaggttctgcagaacaaagaattaaaacaaggaagatccacaagacttgtaaacaaggtt
gacccacaaaaaactgcagaacctgacacgccaacaaaagttatcccaccagattatcac
cgccgtgaatcttctatactgaagatagatgacttccgtaggaattctcaaggcaagaac
aatcgaccccaaaatggtacacagccaggacaccagcgaagcagttccgaggattctcag
agtatgcagactatacccattatcaagattagcaaggaggatagtgtggagagatctcta
caacaagctaagttggagaggcaggaaaagatgcaagaagacccatgtactacgagtgac
caacaatcgctgaacaacaaagacactgtatctttctttccagctgaaagaatgggtgaa
gaattggtaaaaatgaaaaataaccagccaaagatatctcgacaaaagcattcaaagacc
aagtctgtaccaaaagaaactgacttggatgatccttacattttggattatggtgatcca
aaccagacttctgacactgctgccctgctgggaaatggcaaaatgtacaaggaaaatgtt
aaacaaaaggcagcaacggaagttgctctaagttcagggactctcagttcagacgaggac
gcgacactcttagattag
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