Procambarus clarkii (red swamp crayfish): 123747901
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Entry
123747901 CDS
T07930
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcla03000
]
123747901
Transcription factors [BR:
pcla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123747901
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Vir1p
Menin
Motif
Other DBs
NCBI-GeneID:
123747901
NCBI-ProteinID:
XP_069169352
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Position
75:complement(19718499..19774106)
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AA seq
435 aa
AA seq
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MLTLDPPDLKGGSLHSAHLPPHTTHSHSVPHGHHNSHSHTYSLSHHSSLTSLNSSLTSSL
SSPSLASVGTLSAHSPPQTHVPTPTNNNNNNNNTSNSNSNSTSNSSNSKSSASSSSAAAE
RVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRA
VHMKEHPDYKYRPRRKTKTLMKKDKYPLASGLLPADPTRPPVQQVTRDMRDMYNMTNGYM
PNGDYSDYGEWRYSYDSAAYGGQSYPYMTGQMYGGYDMTRGYSPTSSTPSYMNGSYSPAM
YASAPSPYSMSQMASMASVGSVGSVGSSASHSPTPIKSETPTLPVSSPGATMPPSATHTS
AGEYQSVMKREYGAAGPGQQDLSQMISMYLPGSQERHEQQKAVAAAAYMSHAHYHAHGAA
SPDQMPPAPMPLAHM
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccctcgacccgccagacctcaagggcggcagcttacactcggcgcatctcccg
ccccacaccacccactcccactccgtgccccacggacaccacaactcccactcccacacc
tactccctctctcaccactcctctctcacctccctcaactcctctctgacctcctccctc
tccagcccctccctggcctccgtcggcacgctgagcgcccactccccgccccagacacac
gtccccacacccaccaacaacaacaacaacaacaacaacaccagcaacagcaatagcaac
agcaccagcaacagcagcaacagcaagagcagtgcgtcgtcgtccagcgccgcggccgag
cgggtcaagcgccccatgaacgccttcatggtatggtccagaggccagaggcgcaaaatg
gcgcaggaaaaccccaaaatgcacaattcggagatctccaaacgcctcggggccgagtgg
aagctgctctccgagacggaaaagagaccgttcatcgacgaggccaagagactgagggcg
gtccacatgaaagagcaccctgactacaagtacagaccccgcaggaagaccaagacgttg
atgaagaaagacaaatacccgctggcttcgggtctcctacccgcggacccgacccggccc
ccggtccagcaggtgacccgggacatgcgggacatgtacaacatgaccaatggctatatg
cccaatggcgattatagcgactacggtgagtggaggtacagctacgacagcgccgcctac
ggaggccagagttacccctacatgacgggccagatgtatggaggctacgacatgactagg
gggtactcccccacatccagcaccccctcctatatgaatgggtcttacagtccagctatg
tatgcctccgcaccttccccctattctatgagccagatggcgtcaatggcgtccgtgggt
tcggtgggttccgtagggtcatcagcttcccactctcccacgcccattaaatctgagacg
cccacactgcccgtgtcctcaccaggggccaccatgccgccctcagccacccacacctct
gcaggagaatatcaaagtgtgatgaagcgagagtatggcgcggcgggccccggccagcag
gacttgtcacagatgatatctatgtatcttccggggtcccaagaacgccacgagcagcaa
aaggccgtcgccgccgccgcctacatgtcccacgcccactatcacgcccacggcgccgct
tcccccgaccagatgccgcccgcgcctatgccactcgcccatatgtaa
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