Procambarus clarkii (red swamp crayfish): 123748850
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Entry
123748850 CDS
T07930
Name
(RefSeq) putative iroquois-class homeodomain protein irx-1 isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcla03000
]
123748850
Transcription factors [BR:
pcla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
123748850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
DUF1459
PGA2
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
123748850
NCBI-ProteinID:
XP_069194788
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Position
40:complement(12175202..12354717)
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AA seq
471 aa
AA seq
DB search
MANVTYTGASSTSPLWDQSGGIPVNFLQLPYVVDDVEAPYRCCVLKNWSDLVVSSSAGGG
VGSPCEPREPPPLPGGMGVGGYDLMTYQRLASALYAHPPHATLDGATPTSIPPTTPTTLL
AAHDPLLHGNGLDLKDSLGGLGGAAWAYPMYYPYDTLAAYPFSHGYGMAFDAARRKNATR
ETTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPR
NKTDDDDDDDDDKDEDPNHGEKGQDVEVGGEGRGVDDGGSEGSPLRPPSPSSTTGGSDGP
THAPPPPASPVKPRIWSLADMASSSSSPTSPSSTLAGAVGKMSVHRPLHLEASPYARPLP
MAPRLPSPQEALLQVYAKSLGLAPHHAHSFPSLPPGLNGLGSHLSPSVMEAPLPATLGAP
TYTTAPLQPPTVSRPVATRPLPPISPSSLHHTLPGGAKITPAPPPAHRPEG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgtcacctacaccggggcatcctccacctctcccctctgggaccaatctggt
ggcattcctgtgaactttctacagcttccttatgtcgttgatgatgtggaggctccatac
cggtgctgcgtactcaagaattggtctgacctggtggtgtcctcgagtgctggcggcggc
gtcgggagtccctgtgagcctcgcgagcctccacctttaccaggtggtatgggcgtgggc
gggtacgacctaatgacgtaccaacgactagccagcgccctgtacgcccacccgccccac
gccaccctcgacggtgccacgcccacctccatcccgcccaccacgcccaccaccctcctc
gccgcccacgacccgctccttcatggcaacggtttggacctaaaggatagtttaggcggg
cttggtggcgcagcgtgggcctatcctatgtactatccctacgacacactggctgcctat
cccttctcacacgggtacggcatggccttcgacgccgcccgccggaagaacgccaccaga
gaaacgacggcgacgctgaaggcgtggctgaacgagcacaagaagaacccctacccgacc
aagggggagaagatcatgctggctatcattaccaagatgacgctcacccaggtgtcgacg
tggttcgccaacgcccgccggcggctgaagaaggagaacaagatgacgtgggaaccccgc
aacaagacggacgacgacgacgacgacgacgacgacaaggacgaggaccctaaccatggt
gagaagggacaagatgttgaggttggcggtgaaggtcgcggggtggatgacggggggagt
gaggggtcgccgctgcggcccccatccccctccagtacgacagggggaagcgatgggcct
actcacgccccaccccctccagcctcacccgtcaagccacgaatctggtccctggctgat
atggcctcatcgtcgtcgtctcccacgtcgccctcgtccaccctggcgggagcggtgggg
aagatgagcgtccaccggccgctacacctggaggcctccccgtacgcccgcccactaccc
atggctccccgcctcccctcgccgcaggaggcactgctgcaggtctatgccaagtcgctg
gggctggcgccacaccacgcgcactccttcccttccctgcctccaggactcaacgggctg
gggtcacacctctctccctcagtgatggaagccccgcttcccgccaccctgggggcgcca
acatacaccaccgcccccctccagccgcccaccgtcagcagacctgtggcaacccgccca
ctgccgcccatatcgccctcttccctgcaccacacgctccccgggggtgccaagatcacc
ccagcgccgccccctgcgcaccggccggagggttaa
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