Procambarus clarkii (red swamp crayfish): 123749825
Help
Entry
123749825 CDS
T07930
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcla03000
]
123749825
03036 Chromosome and associated proteins [BR:
pcla03036
]
123749825
Transcription factors [BR:
pcla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123749825
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123749825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-met
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-C2H2_jaz
ILV_EDD_C
zf-C2H2_15
zf-C2H2_11
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
123749825
NCBI-ProteinID:
XP_045587921
LinkDB
All DBs
Position
4:complement(45201295..45228068)
Genome browser
AA seq
680 aa
AA seq
DB search
MSWHLRQRMEGSQGGETISDIHNYLDTFNKEIQTGDQTPTADVARVFVDASGQYFYQNVD
GSQQQVVVVSSDGTDGSEGEGGGADGSVMLNGEEDSLHDDGDSLSQGQVALGEDGTLQVI
PGMEQGEGNNQVVLNTGDNNQIVTIVPSSTNPGEVSYVLIVEQSGDTDKDDTVYDFNEAD
EGLSYESGDEDDKKMMRIIHKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKC
SVCERGFKTLASLQNHVNTHTGIKPHRCKFCESTFTTSGELVRHVRYIHTHEKPHKCPDC
DYASVELSKLKRHMRCHSGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECEICHARF
TQSNSLKAHRLIHTGNKPVYACELCPTTCGRKTDLRIHVQKLHTSDKPLKCKKCGKAFPD
RYTFKQHNKSHEGEKCFKCDLCPYASTSARHLESHMLVHTEQKPYQCDQCDQAFRQKQLL
KRHQNLYHNPEYIPPMPREKTQECPECGKAFRHKGNLIRHMAIHDPDASAQEKAQALKIG
RQKRLQLINGQQVEMYTGDVDEDEIMAVEGQDGNQYVVLEVIQLQDGEGHVMMSDGIAVT
DGTLDGSGVLSSSPLMGPETITGDTIGLVSESSLLELQHKKTELKTEISEEAKKEAQKEM
ETCFGFDDEDEGQIHLEFGE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggcatttacggcaacggatggaagggagccaaggaggggaaacgataagtgac
atacataattacctcgacacgttcaataaggagatccagactggagatcaaacacctaca
gccgatgttgctcgagtatttgtagatgcatctggtcaatacttttaccaaaatgttgat
gggagccagcagcaggtggtggtggtgtcgtctgatggaacagatggctcagagggggaa
ggtggcggtgctgatggttctgttatgttgaatggtgaggaggactctctccatgacgat
ggggacagtttgtcacaagggcaggtggcacttggcgaggatggcactctgcaggtcatt
cctggcatggaacagggtgaaggcaacaatcaggtggttcttaatacaggagacaacaat
caaatagtaactattgttccttcatcaactaatcctggtgaagtcagttatgttttgatc
gttgaacagtctggtgatactgacaaagatgatactgtgtatgattttaacgaagcggat
gaaggcctaagttatgaatctggggatgaagatgacaagaaaatgatgcgtatcattcat
aaaaaatcacaaacagttactcaagcccatatgtgcaactattgtaattataccagtcca
aaaagatacttgctctcaagacacatgaagtctcacagtgaagaacggccgcataaatgt
tcagtctgtgaaagagggttcaaaactttagcgtctcttcaaaatcacgttaatacacac
acaggcatcaaaccccatagatgcaagttttgtgaaagcacctttacaacatccggtgag
cttgttcggcatgttcgctacatccatacccacgaaaagccgcacaaatgtccagactgt
gattatgctagtgtggaacttagcaagttgaaacggcacatgcgctgtcattctggagag
agaccctatcagtgtccacattgtacctatgctagtcccgacacatttaagctgaagcga
catttaaggattcacaccggagaaaaaccttacgagtgcgagatctgtcatgcccgtttt
acgcaatccaattctttgaaggcccacaggttaatacatacagggaacaagccggtatat
gcctgtgagctatgcccgacgacgtgtggacggaagactgacctcagaatacacgtacag
aagctccatacctcggacaaacccttgaagtgcaagaaatgtggcaaggccttcccagat
agatacaccttcaaacagcacaacaagtctcatgaaggagaaaagtgttttaagtgtgat
ctgtgtccttacgcttcaacttctgcaagacatctagagtcccacatgcttgtacatact
gaacagaagccttaccaatgtgatcagtgtgaccaggccttccgtcagaagcagctgctg
aagcgacaccaaaacctgtaccacaacccagaatacatcccacccatgcccagagaaaag
acgcaagaatgtccagaatgtggcaaggcatttagacataaaggtaacctcattagacat
atggctatccatgatcccgatgcttcagcacaagaaaaggcacaagcactcaaaattgga
agacaaaaaagattacaacttattaatggtcaacaggtggagatgtacactggtgacgtt
gatgaggatgagataatggccgtagagggtcaggacggcaaccagtatgtcgtcctggag
gtgatacagcttcaggatggcgaaggtcacgtgatgatgtctgatggtattgctgtcact
gatggtacgcttgatggctcaggggtgttgagctcctcacctcttatgggcccagaaaca
ataactggagatactataggtttagtttccgagtcttctcttttggagcttcagcacaag
aaaaccgaattaaaaacggaaattagtgaagaggccaagaaggaggctcagaaggagatg
gagacatgctttggctttgacgatgaggatgaagggcaaattcacctggaatttggagaa
tga
DBGET
integrated database retrieval system
